RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
CMTM1-215ENST00000531885 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
CMTM1-215ENST00000531885 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
CMTM1-215ENST00000531885 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
CMTM1-215ENST00000531885 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
CMTM1-215ENST00000531885 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
CMTM1-215ENST00000531885 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
CMTM1-215ENST00000531885 ADCY6O43306 1168 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 ALAS1P13196 640 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 NKX3-2P78367 333 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
CMTM1-215ENST00000531885 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 NAPBQ9H115 298 aa13.72□□□□□ -0.21
CMTM1-215ENST00000531885 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
CMTM1-215ENST00000531885 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 PFKMP08237 780 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 CCL23P55773 120 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 STAG1Q8WVM7 1258 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 GMCL1Q96IK5 515 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 FGD4Q96M96 766 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 KATNBL1Q9H079 304 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
CMTM1-215ENST00000531885 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 Q9Y3F1 56 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 PCDHA11Q9Y5I1 949 aa13.71□□□□□ -0.21
CMTM1-215ENST00000531885 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 ACTN1P12814 892 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 TFAP4Q01664 338 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 AGBL1Q96MI9 1066 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 MPHOSPH6Q99547 160 aaKnown RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 NOC4LQ9BVI4 516 aaKnown RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
CMTM1-215ENST00000531885 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
CMTM1-215ENST00000531885 RAD50Q92878 1312 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 ERC2O15083 957 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 CTAGE5O15320 804 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 B4GALT4O60513 344 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 PLA2G6O60733 806 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 ATP2A2P16615 1042 aaKnown RBP13.69□□□□□ -0.22
CMTM1-215ENST00000531885 MCCP23508 829 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 CPT1AP50416 773 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
CMTM1-215ENST00000531885 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
CMTM1-215ENST00000531885 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CMTM1-215ENST00000531885 ASTN1O14525 1302 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 BDP1A6H8Y1 2624 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 SMPD1P17405 629 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 ALDH8A1Q9H2A2 487 aaPredicted RBP13.68□□□□□ -0.22
CMTM1-215ENST00000531885 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
CMTM1-215ENST00000531885 TRANK1O15050 2925 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 REV3LO60673 3130 aa13.68□□□□□ -0.22
CMTM1-215ENST00000531885 GBF1Q92538 1859 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 M0R2C6 588 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 RFC2P35250 354 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 RABGGTBP53611 331 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 PSMC6P62333 389 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 PPARAQ07869 468 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CMTM1-215ENST00000531885 CCDC96Q2M329 555 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 RCSD1Q6JBY9 416 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 KCTD1Q719H9 257 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 FAM122AQ96E09 287 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
CMTM1-215ENST00000531885 ZNF536O15090 1300 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms