RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
SF3B2-212ENST00000531589 LOC102724159A0A0B4J2E5 919 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 SOWAHBA6NEL2 793 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 ZNF543Q08ER8 600 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 PWP2Q15269 919 aaKnown RBP15.42■□□□□ 0.06
SF3B2-212ENST00000531589 MUM1L1Q5H9M0 696 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
SF3B2-212ENST00000531589 TTBK2Q6IQ55 1244 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
SF3B2-212ENST00000531589 RASGRP2Q7LDG7 609 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 MPHOSPH6Q99547 160 aaKnown RBP15.42■□□□□ 0.06
SF3B2-212ENST00000531589 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
SF3B2-212ENST00000531589 CNNM2Q9H8M5 875 aa15.42■□□□□ 0.06
SF3B2-212ENST00000531589 SMCHD1A6NHR9 2005 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
SF3B2-212ENST00000531589 KDM4AO75164 1064 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 RAG1P15918 1043 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 GNASQ5JWF2 1037 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 ANKRD33Q7Z3H0 272 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 RUFY2Q8WXA3 655 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 BADQ92934 168 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 VTI1AQ96AJ9 217 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 KRT23Q9C075 422 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 KATNBL1Q9H079 304 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 TMEM39AQ9NV64 488 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 NEDD4P46934 1319 aa15.41■□□□□ 0.06
SF3B2-212ENST00000531589 KIAA0355O15063 1070 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 ASGR1P07306 291 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 IQSEC1Q6DN90 963 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 DEFB123Q8N688 67 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 ANKS1AQ92625 1134 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 ZSCAN10Q96SZ4 725 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-212ENST00000531589 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 AP5M1Q9H0R1 490 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 VTA1Q9NP79 307 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
SF3B2-212ENST00000531589 PTPDC1A2A3K4 754 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 TRIM43BA6NCK2 446 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 B4DLN1 442 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 ZEB2O60315 1214 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 CABYRO75952 493 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
SF3B2-212ENST00000531589 NKX3-2P78367 333 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-212ENST00000531589 TTC22Q5TAA0 569 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 SH3RF1Q7Z6J0 888 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 TRIM43Q96BQ3 446 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-212ENST00000531589 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 MAF1Q9H063 256 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 Q9Y3F1 56 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 RAD50Q92878 1312 aa15.39■□□□□ 0.05
SF3B2-212ENST00000531589 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-212ENST00000531589 MYADML2A6NDP7 307 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 B4E1Z4 1266 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 NFIBO00712 420 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 ADCY6O43306 1168 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 FAAP100Q0VG06 881 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 TRDNQ13061 729 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 SEZ6LQ9BYH1 1024 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 ZSWIM5Q9P217 1185 aa15.38■□□□□ 0.05
SF3B2-212ENST00000531589 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 ARVCFO00192 962 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 PDE4AP27815 886 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 CDK7P50613 346 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 SHHQ15465 462 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 FSCN1Q16658 493 aaKnown RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 FAM109BQ6ICB4 259 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 EEPD1Q7L9B9 569 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 TLK2Q86UE8 772 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 DNERQ8NFT8 737 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 GNEQ9Y223 722 aaKnown RBP15.37■□□□□ 0.05
SF3B2-212ENST00000531589 ASTN1O14525 1302 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 TNKSO95271 1327 aa15.37■□□□□ 0.05
SF3B2-212ENST00000531589 SZT2Q5T011 3432 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 DYNC1LI2O43237 492 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-212ENST00000531589 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
SF3B2-212ENST00000531589 GOLGA8HP0CJ92 632 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 SMPD1P17405 629 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 CALML3P27482 149 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 FPGSQ05932 587 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 FBXO16Q8IX29 292 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-212ENST00000531589 ENAHQ8N8S7 591 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-212ENST00000531589 RGS22Q8NE09 1264 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
SF3B2-212ENST00000531589 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-212ENST00000531589 CTAGE5O15320 804 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
SF3B2-212ENST00000531589 TIMP1P01033 207 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 GSPT1P15170 499 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms