RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 MAMDC4Q6UXC1 1216 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 ZNF467Q7Z7K2 595 aaPredicted RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 FBXO11Q86XK2 927 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 ANKLE1Q8NAG6 615 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 DIS3LQ8TF46 1054 aaKnown RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 CLEC4DQ8WXI8 215 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
FOXR1-202ENST00000531539 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
FOXR1-202ENST00000531539 ZNF865P0CJ78 1059 aaPredicted RBP16.83■□□□□ 0.28
FOXR1-202ENST00000531539 CALML3P27482 149 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 HSPA4P34932 840 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 LIFRP42702 1097 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.28
FOXR1-202ENST00000531539 NECAB2Q7Z6G3 386 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 UBE2Q1Q7Z7E8 422 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 RAB11FIP4Q86YS3 637 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 WDR19Q8NEZ3 1342 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
FOXR1-202ENST00000531539 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 KCNB2Q92953 911 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 FGD4Q96M96 766 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.83■□□□□ 0.28
FOXR1-202ENST00000531539 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 ZHX1Q9UKY1 873 aaPredicted RBP16.83■□□□□ 0.28
FOXR1-202ENST00000531539 SNX14Q9Y5W7 946 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 SLC12A7Q9Y666 1083 aa16.83■□□□□ 0.28
FOXR1-202ENST00000531539 SMCHD1A6NHR9 2005 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ZNF236Q9UL36 1845 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ABCB11O95342 1321 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 SYNGAP1Q96PV0 1343 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ASB14A6NK59 587 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ZBTB5O15062 677 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 CPA1P15085 419 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 ARMCX2Q7L311 632 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
FOXR1-202ENST00000531539 PIGSQ96S52 555 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 HTATIP2Q9BUP3 242 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 RIOX1Q9H6W3 641 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 FAM184BQ9ULE4 1060 aa16.82■□□□□ 0.28
FOXR1-202ENST00000531539 MRPL11Q9Y3B7 192 aaKnown RBP16.82■□□□□ 0.28
FOXR1-202ENST00000531539 DDX49Q9Y6V7 483 aaKnown RBP16.82■□□□□ 0.28
FOXR1-202ENST00000531539 DDAH1O94760 285 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 HMGB1P09429 215 aaKnown RBP16.81■□□□□ 0.28
FOXR1-202ENST00000531539 RXRAP19793 462 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 KIF5BP33176 963 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 MNX1P50219 401 aaPredicted RBP16.81■□□□□ 0.28
FOXR1-202ENST00000531539 FGD1P98174 961 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 GJC2Q5T442 439 aaPredicted RBP16.81■□□□□ 0.28
FOXR1-202ENST00000531539 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 MAP3K14Q99558 947 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 C11orf49Q9H6J7 331 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 PCDHA1Q9Y5I3 950 aa16.81■□□□□ 0.28
FOXR1-202ENST00000531539 CYTH3O43739 400 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 CALM1P0DP23 149 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 CALM2P0DP24 149 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 CALM3P0DP25 149 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 RARBP10826 455 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 RPS6P62753 249 aaKnown RBP16.8■□□□□ 0.28
FOXR1-202ENST00000531539 SLC30A10Q6XR72 485 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 EEPD1Q7L9B9 569 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 MCF2L2Q86YR7 1114 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 FANCBQ8NB91 859 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 MTMR8Q96EF0 704 aa16.8■□□□□ 0.28
FOXR1-202ENST00000531539 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
FOXR1-202ENST00000531539 PNMA6FA0A0J9YX94 578 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 PPP1R11O60927 126 aaPredicted RBP16.79■□□□□ 0.28
FOXR1-202ENST00000531539 AKR1A1P14550 325 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 GNAQP50148 359 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
FOXR1-202ENST00000531539 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
FOXR1-202ENST00000531539 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
FOXR1-202ENST00000531539 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
FOXR1-202ENST00000531539 PLXNA1Q9UIW2 1896 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 ASTN1O14525 1302 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 PLEKHA8P1O95397 391 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 PGK1P00558 417 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 CFBP00751 764 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 PSMA5P28066 241 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
FOXR1-202ENST00000531539 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 Q6ZUG5 572 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms