RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CCDC96Q2M329 555 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 MFSD5Q6N075 450 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 TICAM2Q86XR7 235 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 PLXNA1Q9UIW2 1896 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 DDX49Q9Y6V7 483 aaKnown RBP15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 ASTN1O14525 1302 aa15.13■□□□□ 0.01
TM9SF1-211ENST00000531406 ICAM1P05362 532 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 NSMFQ6X4W1 530 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 GNEQ9Y223 722 aaKnown RBP15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 SMCHD1A6NHR9 2005 aa15.12■□□□□ 0.01
TM9SF1-211ENST00000531406 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 SMPD1P17405 629 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 SLC16A2P36021 539 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 PPIGQ13427 754 aaKnown RBP eCLIP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 IQSEC1Q6DN90 963 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 TAPT1Q6NXT6 567 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 CXCL17Q6UXB2 119 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 C16orf59Q7L2K0 433 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 TLK2Q86UE8 772 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 FAM126BQ8IXS8 530 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 SLC43A3Q8NBI5 491 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 MORC4Q8TE76 937 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 MYLIPQ8WY64 445 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 AP5M1Q9H0R1 490 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 PDGFCQ9NRA1 345 aa15.11■□□□□ 0.01
TM9SF1-211ENST00000531406 TMEM265A0A087WTH1 108 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 TLR3O15455 904 aaKnown RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 CABYRO75952 493 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 PTGS1P23219 599 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 FSCN1Q16658 493 aaKnown RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 TMEM63BQ5T3F8 832 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 ZNF589Q86UQ0 364 aaPredicted RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 MAFAQ8NHW3 353 aaPredicted RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 PURBQ96QR8 312 aaKnown RBP15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 ZMYM6O95789 1325 aa15.1■□□□□ 0.01
TM9SF1-211ENST00000531406 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 CD4P01730 458 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 CSF2RAP15509 400 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 HAND2P61296 217 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 BAATQ14032 418 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 EEPD1Q7L9B9 569 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 FBXO16Q8IX29 292 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 TMEM199Q8N511 208 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 VTA1Q9NP79 307 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 ADD3Q9UEY8 706 aaKnown RBP15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 Q9Y3F1 56 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 FRMPD2Q68DX3 1309 aaPredicted RBP15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
TM9SF1-211ENST00000531406 CUL9Q8IWT3 2517 aa15.08■□□□□ 0.01
TM9SF1-211ENST00000531406 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 NFIBO00712 420 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 ZEB2O60315 1214 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 PDHBP11177 359 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 DNAJB2P25686 324 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 ITGA7Q13683 1181 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 RASIP1Q5U651 963 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 RILPL2Q969X0 211 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 TTC14Q96N46 770 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 COL25A1Q9BXS0 654 aaPredicted RBP15.08■□□□□ 0
TM9SF1-211ENST00000531406 GRIN2DO15399 1336 aa15.08■□□□□ 0
TM9SF1-211ENST00000531406 PCP11498 1178 aaKnown RBP15.07■□□□□ 0
TM9SF1-211ENST00000531406 FOSL2P15408 326 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 CYP2C18P33260 490 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 ALDH5A1P51649 535 aaPredicted RBP15.07■□□□□ 0
TM9SF1-211ENST00000531406 ZNF543Q08ER8 600 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 AAMPQ13685 434 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 MFSD6Q6ZSS7 791 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 ZNF365Q70YC5 407 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 TBC1D10CQ8IV04 446 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 SMC5Q8IY18 1101 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 CLEC4DQ8WXI8 215 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 SEZ6LQ9BYH1 1024 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 PNMA2Q9UL42 364 aa15.07■□□□□ 0
TM9SF1-211ENST00000531406 LOC102724159A0A0B4J2E5 919 aa15.06■□□□□ 0
TM9SF1-211ENST00000531406 PTPDC1A2A3K4 754 aa15.06■□□□□ 0
TM9SF1-211ENST00000531406 SNHG28P0DPA3 235 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms