RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 COBLL1Q53SF7 1204 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 PPP1R18Q6NYC8 613 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 CYP26C1Q6V0L0 522 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 TBCKQ8TEA7 893 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 MRPL44Q9H9J2 332 aaKnown RBP19.34■□□□□ 0.69
BRCA2-204ENST00000530893 TAB2Q9NYJ8 693 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 BICDL2A1A5D9 508 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 USP17L5A8MUK1 530 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 KIF5CO60282 957 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 PLCG1P19174 1290 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 HOXA7P31268 230 aaPredicted RBP19.33■□□□□ 0.68
BRCA2-204ENST00000530893 TUBB2AQ13885 445 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 ARHGAP29Q52LW3 1261 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 IRF2BP1Q8IU81 584 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 TUBB2BQ9BVA1 445 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 TRIM9Q9C026 710 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 CPVLQ9H3G5 476 aa19.33■□□□□ 0.68
BRCA2-204ENST00000530893 LGALS16A8MUM7 142 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 UBXN1Q04323 297 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 CALML4Q96GE6 196 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 NUP88Q99567 741 aaPredicted RBP19.32■□□□□ 0.68
BRCA2-204ENST00000530893 CARD6Q9BX69 1037 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 MAPK8IP1Q9UQF2 711 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 TTLL1O95922 423 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 LRRN4CLQ8ND94 238 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 VAT1LQ9HCJ6 419 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 FAM53CQ9NYF3 392 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 MYO1AQ9UBC5 1043 aa19.32■□□□□ 0.68
BRCA2-204ENST00000530893 MAGEC2Q9UBF1 373 aaPredicted RBP19.32■□□□□ 0.68
BRCA2-204ENST00000530893 FXR2P51116 673 aaKnown RBP eCLIP19.31■□□□□ 0.68
BRCA2-204ENST00000530893 ADCY7P51828 1080 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 TTI2Q6NXR4 508 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 FAM114A1Q8IWE2 563 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 MB21D1Q8N884 522 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 TRIM47Q96LD4 638 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 ZC3H12CQ9C0D7 883 aaKnown RBP19.31■□□□□ 0.68
BRCA2-204ENST00000530893 SERPINB13Q9UIV8 391 aa19.31■□□□□ 0.68
BRCA2-204ENST00000530893 COBLO75128 1261 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 MTMR9Q96QG7 549 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 EXOC1Q9NV70 894 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 STK17AQ9UEE5 414 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 CCNE1P24864 410 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 KRT9P35527 623 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 TECP42680 631 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 DNM2P50570 870 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 PPP2R3AQ06190 1150 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 TMEM266Q2M3C6 531 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 CNNM4Q6P4Q7 775 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 KRT222Q8N1A0 295 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 ZNF507Q8TCN5 953 aa19.3■□□□□ 0.68
BRCA2-204ENST00000530893 BIN2Q9UBW5 565 aaPredicted RBP19.3■□□□□ 0.68
BRCA2-204ENST00000530893 NRXN2Q9P2S2 1712 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 ANKRD31Q8N7Z5 1873 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 TRIM49BA6NDI0 452 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PMS1P54277 932 aaKnown RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 TUBB4BP68371 445 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PDE4DQ08499 809 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PICALMQ13492 652 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PDIA5Q14554 519 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 GPATCH4Q5T3I0 446 aaKnown RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 HHIPL2Q6UWX4 724 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 GPR161Q8N6U8 529 aaKnown RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 LRRC15Q8TF66 581 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 P2RX5Q93086 422 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 LZTFL1Q9NQ48 299 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PNMA6FA0A0J9YX94 578 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 AKR1B1P15121 316 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 NPR1P16066 1061 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 ZSCAN20P17040 1043 aaPredicted RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 ERVK-24P63145 666 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 ZNF543Q08ER8 600 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 CALCRLQ16602 461 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 JAKMIP3Q5VZ66 844 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 RETREG2Q8NC44 543 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 PLIN2Q99541 437 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 MMTAG2Q9BU76 263 aaKnown RBP19.29■□□□□ 0.68
BRCA2-204ENST00000530893 NUP58Q9BVL2 599 aa19.29■□□□□ 0.68
BRCA2-204ENST00000530893 SRGNP10124 158 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 CLCN6P51797 869 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 ASIC1P78348 528 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 UTP14CQ5TAP6 766 aaKnown RBP19.28■□□□□ 0.68
BRCA2-204ENST00000530893 DPP8Q6V1X1 898 aaPredicted RBP19.28■□□□□ 0.68
BRCA2-204ENST00000530893 POTEDQ86YR6 584 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 CSGALNACT2Q8N6G5 542 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 OR8K1Q8NGG5 319 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 DNAJC7Q99615 494 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 LRRC27Q9C0I9 530 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 RIC8AQ9NPQ8 531 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 CAPN11Q9UMQ6 739 aa19.28■□□□□ 0.68
BRCA2-204ENST00000530893 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
BRCA2-204ENST00000530893 PVALEFA0A1B0GWK0 134 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 RIMBP2O15034 1052 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 TSR1Q2NL82 804 aaKnown RBP19.27■□□□□ 0.68
BRCA2-204ENST00000530893 PPP4R3AQ6IN85 833 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms