RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 IFNAR1P17181 557 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 ARHGEF6Q15052 776 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 NECAB1Q8N987 351 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 IL27Q8NEV9 243 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 AMNQ9BXJ7 453 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 ACAD9Q9H845 621 aa24.7■■□□□ 1.55
CAPN1-220ENST00000530567 SLC15A5A6NIM6 579 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 ST18O60284 1047 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 ABRAQ8N0Z2 381 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 SOCS4Q8WXH5 440 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 GTF3C6Q969F1 213 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 FBXO40Q9UH90 709 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 NFIBO00712 420 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 STRNO43815 780 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 FLT3LGP49771 235 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 PHKBQ93100 1093 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 MMP19Q99542 508 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 CWC22Q9HCG8 908 aaKnown RBP24.69■■□□□ 1.54
CAPN1-220ENST00000530567 IVNS1ABPQ9Y6Y0 642 aa24.69■■□□□ 1.54
CAPN1-220ENST00000530567 ABCB11O95342 1321 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 ZNFX1Q9P2E3 1918 aaKnown RBP24.68■■□□□ 1.54
CAPN1-220ENST00000530567 OPLAHO14841 1288 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 PPFIA3O75145 1194 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 FCER1AP12319 257 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 ADORA2AP29274 412 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 A1CFQ9NQ94 594 aaKnown RBP24.68■■□□□ 1.54
CAPN1-220ENST00000530567 SEC63Q9UGP8 760 aaKnown RBP24.68■■□□□ 1.54
CAPN1-220ENST00000530567 PCDHA1Q9Y5I3 950 aa24.68■■□□□ 1.54
CAPN1-220ENST00000530567 V9GY48 417 aaPredicted RBP24.68■■□□□ 1.54
CAPN1-220ENST00000530567 RBBP6Q7Z6E9 1792 aaKnown RBP24.67■■□□□ 1.54
CAPN1-220ENST00000530567 CTDNEP1O95476 244 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 HOXD10P28358 340 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 PRMT2P55345 433 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 MAP2K5Q13163 448 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 NUDT12Q9BQG2 462 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 PTPN22Q9Y2R2 807 aa24.67■■□□□ 1.54
CAPN1-220ENST00000530567 LCTP09848 1927 aa24.66■■□□□ 1.54
CAPN1-220ENST00000530567 DNAJC25-GNG10A0A024R161 153 aa24.66■■□□□ 1.54
CAPN1-220ENST00000530567 PRPF3O43395 683 aaKnown RBP24.66■■□□□ 1.54
CAPN1-220ENST00000530567 COBLO75128 1261 aa24.66■■□□□ 1.54
CAPN1-220ENST00000530567 KCTD2Q14681 263 aa24.66■■□□□ 1.54
CAPN1-220ENST00000530567 PKN1Q16512 942 aa24.66■■□□□ 1.54
CAPN1-220ENST00000530567 RNF26Q9BY78 433 aaPredicted RBP24.66■■□□□ 1.54
CAPN1-220ENST00000530567 CPLX1O14810 134 aa24.65■■□□□ 1.54
CAPN1-220ENST00000530567 HOXC6P09630 235 aa24.65■■□□□ 1.54
CAPN1-220ENST00000530567 IRF5Q13568 498 aa24.65■■□□□ 1.54
CAPN1-220ENST00000530567 MRPL11Q9Y3B7 192 aaKnown RBP24.65■■□□□ 1.54
CAPN1-220ENST00000530567 PTCH2Q9Y6C5 1203 aa24.65■■□□□ 1.54
CAPN1-220ENST00000530567 DTNBO60941 627 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 PGK2P07205 417 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 RGS2P41220 211 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 WWC2Q6AWC2 1192 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 TYW1BQ6NUM6 668 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 GPKOWQ92917 476 aaPredicted RBP eCLIP24.64■■□□□ 1.54
CAPN1-220ENST00000530567 ZSCAN31Q96LW9 406 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-220ENST00000530567 SLC26A6Q9BXS9 759 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 SH2B1Q9NRF2 756 aaPredicted RBP24.64■■□□□ 1.54
CAPN1-220ENST00000530567 CYP39A1Q9NYL5 469 aa24.64■■□□□ 1.54
CAPN1-220ENST00000530567 PLXNA1Q9UIW2 1896 aa24.64■■□□□ 1.53
CAPN1-220ENST00000530567 CYP2B6P20813 491 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 TRAF1Q13077 416 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 PFKFB3Q16875 520 aaPredicted RBP24.63■■□□□ 1.53
CAPN1-220ENST00000530567 CPLX2Q6PUV4 134 aaKnown RBP24.63■■□□□ 1.53
CAPN1-220ENST00000530567 NSMFQ6X4W1 530 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 SLC30A10Q6XR72 485 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 ANKRD35Q8N283 1001 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 NPLOC4Q8TAT6 608 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 TBC1D5Q92609 795 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 FGD4Q96M96 766 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 APBA2Q99767 749 aa24.63■■□□□ 1.53
CAPN1-220ENST00000530567 PFASO15067 1338 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
CAPN1-220ENST00000530567 MCM2P49736 904 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 GHRHRQ02643 423 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 PKN2Q16513 984 aaKnown RBP24.62■■□□□ 1.53
CAPN1-220ENST00000530567 ZNF792Q3KQV3 632 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 FBXO46Q6PJ61 603 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-220ENST00000530567 HEATR3Q7Z4Q2 680 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 RGS22Q8NE09 1264 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 NSUN7Q8NE18 718 aaKnown RBP24.62■■□□□ 1.53
CAPN1-220ENST00000530567 RBM27Q9P2N5 1060 aaKnown RBP24.62■■□□□ 1.53
CAPN1-220ENST00000530567 STK36Q9NRP7 1315 aa24.62■■□□□ 1.53
CAPN1-220ENST00000530567 STXBP3O00186 592 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 SCG2P13521 617 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 BAATQ14032 418 aaPredicted RBP24.61■■□□□ 1.53
CAPN1-220ENST00000530567 COL13A1Q5TAT6 717 aaPredicted RBP24.61■■□□□ 1.53
CAPN1-220ENST00000530567 CCDC83Q8IWF9 413 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 FAM133AQ8N9E0 248 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 DDX11Q96FC9 970 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 TMX3Q96JJ7 454 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 ASTN1O14525 1302 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 CDKL5O76039 1030 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 IGHA2P01877 340 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 RPS6P62753 249 aaKnown RBP24.61■■□□□ 1.53
CAPN1-220ENST00000530567 CNTN2Q02246 1040 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 SSRP1Q08945 709 aaKnown RBP24.61■■□□□ 1.53
CAPN1-220ENST00000530567 CCL14Q16627 93 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 DPP9Q86TI2 863 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 TRIM22Q8IYM9 498 aa24.61■■□□□ 1.53
CAPN1-220ENST00000530567 RAET1EQ8TD07 263 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms