RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 ZNF428Q96B54 188 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 HYPKQ9NX55 129 aa11.17□□□□□ -0.62
CCDC90B-217ENST00000530253 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 PAPLNO95428 1278 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 RFC4P35249 363 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 ZNF792Q3KQV3 632 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 FAM129BQ96TA1 746 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 ABCB6Q9NP58 842 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 CRIM1Q9NZV1 1036 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 ADCY9O60503 1353 aa11.16□□□□□ -0.62
CCDC90B-217ENST00000530253 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 ID3Q02535 119 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 HLFQ16534 295 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 ALDH1L2Q3SY69 923 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 KRT82Q9NSB4 513 aa11.15□□□□□ -0.62
CCDC90B-217ENST00000530253 ANKRD36CQ5JPF3 1778 aa11.14□□□□□ -0.63
CCDC90B-217ENST00000530253 ORC1Q13415 861 aa11.14□□□□□ -0.63
CCDC90B-217ENST00000530253 BCL2L13Q9BXK5 485 aa11.14□□□□□ -0.63
CCDC90B-217ENST00000530253 MKNK2Q9HBH9 465 aa11.14□□□□□ -0.63
CCDC90B-217ENST00000530253 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
CCDC90B-217ENST00000530253 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 GADD45BO75293 160 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 TM4SF1P30408 202 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 DDR1Q08345 913 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 AIMP1Q12904 312 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 LCE1DQ5T752 114 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 KIF6Q6ZMV9 814 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 ZNF574Q6ZN55 896 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 ATG4DQ86TL0 474 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 NLGN2Q8NFZ4 835 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 PLBD2Q8NHP8 589 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 VAV3Q9UKW4 847 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 CACNA1FO60840 1977 aa11.13□□□□□ -0.63
CCDC90B-217ENST00000530253 NUP98P52948 1817 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 LIG1P18858 919 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 POLD1P28340 1107 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 NFIXQ14938 502 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 TBC1D9BQ66K14 1250 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 CLEC4GQ6UXB4 293 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 ARHGAP27Q6ZUM4 889 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 CCDC74AQ96AQ1 378 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 CCDC86Q9H6F5 360 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
CCDC90B-217ENST00000530253 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 POLRMTO00411 1230 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 MMP10P09238 476 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 FUT4P22083 530 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 PRKCQQ04759 706 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 CDK5R2Q13319 367 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 KIF4BQ2VIQ3 1234 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 SPRED2Q7Z698 418 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 N4BP2Q86UW6 1770 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-217ENST00000530253 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 BCAR3O75815 825 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 GSTP1P09211 210 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 IFI16Q16666 785 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 WFDC3Q8IUB2 231 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PLD6Q8N2A8 252 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PPP4R2Q9NY27 417 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 CARMIL3Q8ND23 1372 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
CCDC90B-217ENST00000530253 PTPRCP08575 1304 aa11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 EIF1AYO14602 144 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 TCIRG1Q13488 830 aa11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 RC3H2Q9HBD1 1191 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 MAP3K2Q9Y2U5 619 aa11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
CCDC90B-217ENST00000530253 ABCC12Q96J65 1359 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 CARNS1A5YM72 827 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 F6X3S4 739 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms