RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GPHN	Q9NQX3	736 aa	Predicted RBP	4.89	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	FBXO40	Q9UH90	709 aa		4.89	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SERPINB13	Q9UIV8	391 aa		4.89	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	LTBP2	Q14767	1821 aa		4.89	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PTPRC	P08575	1304 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CREB3	O43889	395 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	POLR3D	P05423	398 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	NUBP1	P53384	320 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RABEP1	Q15276	862 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PRAMEF19	Q5SWL8	479 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MAPKAPK5	Q8IW41	473 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SIRT2	Q8IXJ6	389 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PPP2R3C	Q969Q6	453 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SNX21	Q969T3	373 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RILPL2	Q969X0	211 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	NEUROD6	Q96NK8	337 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	LARP6	Q9BRS8	491 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PANK2	Q9BZ23	570 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	NOD1	Q9Y239	953 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	YBX2	Q9Y2T7	364 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970		A0A1B0GUL7	405 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CNMD	O75829	334 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	BAIAP3	O94812	1187 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	REC8	O95072	547 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PYGB	P11216	843 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	XRCC6	P12956	609 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CYP2C18	P33260	490 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TSNAXIP1	Q2TAA8	658 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CCDC158	Q5M9N0	1113 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TTC22	Q5TAA0	569 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PLEKHM2	Q8IWE5	1019 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	FAM178B	Q8IXR5	827 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ANKRD44	Q8N8A2	993 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SPATA5	Q8NB90	893 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TGFBRAP1	Q8WUH2	860 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SAMD11	Q96NU1	681 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MPHOSPH6	Q99547	160 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	EHD4	Q9H223	541 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	VRTN	Q9H8Y1	702 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	BTBD7	Q9P203	1132 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RPS6KL1	Q9Y6S9	549 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RAD50	Q92878	1312 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RECK	O95980	971 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MCC	P23508	829 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RASGRF1	Q13972	1273 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MCTP1	Q6DN14	999 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	DHX38	Q92620	1227 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ABHD16B	Q9H3Z7	469 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GRPEL1	Q9HAV7	217 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	EXOC6B	Q9Y2D4	811 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SYNRG	Q9UMZ2	1314 aa		4.88	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	WDR46	O15213	610 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SH3BP5	O60239	455 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ASGR1	P07306	291 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CA3	P07451	260 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GSPT1	P15170	499 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	DSG3	P32926	999 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	PPP4C	P60510	307 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TTC39A	Q5SRH9	613 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	EP400NL	Q6ZTU2	488 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ZNF467	Q7Z7K2	595 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RIOX2	Q8IUF8	465 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MORC4	Q8TE76	937 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ATOH1	Q92858	354 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	DCTPP1	Q9H773	170 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GOPC	Q9HD26	462 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TNKS	O95271	1327 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	COBL	O75128	1261 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ZBED4	O75132	1171 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ADAMTS4	O75173	837 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CD2BP2	O95400	341 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GNAI2	P04899	355 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SDS	P20132	328 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	KCNA5	P22460	613 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	STAT3	P40763	770 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	RABGGTB	P53611	331 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ZFYVE27	Q5T4F4	411 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CEP85	Q6P2H3	762 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	METTL16	Q86W50	562 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	FAM126B	Q8IXS8	530 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MAGEB6	Q8N7X4	407 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	KLHDC9	Q8NEP7	349 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	NSUN4	Q96CB9	384 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	MFRP	Q9BY79	579 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	FLT1	P17948	1338 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	KPNA6	O60684	536 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	CDK7	P50613	346 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GJA9	P57773	515 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	GRB10	Q13322	594 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TSHZ3	Q63HK5	1081 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TMEM179	Q6ZVK1	233 aa		4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	TGS1	Q96RS0	853 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	UPF3A	Q9H1J1	476 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-208	ENST00000529970	ANO2	Q9NQ90	1003 aa		4.87	□□□□□ -1.63

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