RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ACRP10323 421 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 NME1P15531 152 aaKnown RBP7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 ITGB7P26010 798 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 GIPRP48546 466 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 ZYXQ15942 572 aaKnown RBP7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 CYB5D2Q8WUJ1 264 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 CNNM2Q9H8M5 875 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 ZNF408Q9H9D4 720 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 LRRC4CQ9HCJ2 640 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 U3KQE9 123 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 IMPDH2P12268 514 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 GBP1P32455 592 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 EZH2Q15910 746 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 CDCP2Q5VXM1 449 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 PPP1R13LQ8WUF5 828 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 DHX38Q92620 1227 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 OSBPL1AQ9BXW6 950 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 TPX2Q9ULW0 747 aaKnown RBP7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 CPDO75976 1380 aa7.16□□□□□ -1.26
AMBRA1-209ENST00000529963 CAMTA1Q9Y6Y1 1673 aa7.15□□□□□ -1.26
AMBRA1-209ENST00000529963 SSH2Q76I76 1423 aa7.15□□□□□ -1.26
AMBRA1-209ENST00000529963 TNS1Q9HBL0 1735 aaKnown RBP7.15□□□□□ -1.26
AMBRA1-209ENST00000529963 UBOX5O94941 541 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 GTF2F1P35269 517 aaKnown RBP eCLIP7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 PPP2R5EQ16537 467 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 ZDHHC13Q8IUH4 622 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 FAM181AQ8N9Y4 354 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 DNAJB8Q8NHS0 232 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 GIMAP7Q8NHV1 300 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 HEXIM2Q96MH2 286 aaKnown RBP7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 BRD4O60885 1362 aaPredicted RBP7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 TOPAZ1Q8N9V7 1692 aa7.15□□□□□ -1.27
AMBRA1-209ENST00000529963 USP19O94966 1318 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 CENPJQ9HC77 1338 aaPredicted RBP7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 KIAA1210Q9ULL0 1709 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 NRKQ7Z2Y5 1582 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 SMAD7O15105 426 aaKnown RBP7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 TGFB1P01137 390 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 RBBP8NLQ8NC74 664 aaPredicted RBP7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 ZNF512BQ96KM6 892 aaPredicted RBP7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 CAMKK2Q96RR4 588 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 TNKS2Q9H2K2 1166 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 CEP131Q9UPN4 1083 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 PPIP5K1Q6PFW1 1433 aa7.14□□□□□ -1.27
AMBRA1-209ENST00000529963 PRR33A8MZF0 331 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 RGS13O14921 159 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 GSC2O15499 205 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 GCP02774 474 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 ATP2B1P20020 1258 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 FAM214BQ7L5A3 538 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 TMEM192Q8IY95 271 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 FAM86C1Q9NVL1 165 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 STRIP2Q9ULQ0 834 aa7.13□□□□□ -1.27
AMBRA1-209ENST00000529963 PRR19A6NJB7 356 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 K7ELQ4 463 aaPredicted RBP7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 CBX7O95931 251 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 ITIH2P19823 946 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 GUCY2CP25092 1073 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 HOXA10P31260 410 aaPredicted RBP7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 CYP27C1Q4G0S4 372 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 UNC5AQ6ZN44 842 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 TTC6Q86TZ1 520 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 TM9SF2Q99805 663 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 PCDHB10Q9UN67 800 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 LMO7Q8WWI1 1683 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 RREB1Q92766 1687 aa7.12□□□□□ -1.27
AMBRA1-209ENST00000529963 A0A1W2PQH9 124 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 TNFRSF10CO14798 259 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 LRRN2O75325 713 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 HNRNPLLQ8WVV9 542 aaKnown RBP7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 SREK1Q8WXA9 508 aaKnown RBP7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 SLC6A18Q96N87 628 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 LEMD3Q9Y2U8 911 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 LTBP3Q9NS15 1303 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 COL5A2P05997 1499 aaPredicted RBP7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 USP6P35125 1406 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 CRB1P82279 1406 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 CYP27A1Q02318 531 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 NUP188Q5SRE5 1749 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 TDRD10Q5VZ19 366 aaKnown RBP7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 ANKS3Q6ZW76 656 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 KREMEN1Q96MU8 473 aa7.11□□□□□ -1.27
AMBRA1-209ENST00000529963 EVC2Q86UK5 1308 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 CEP350Q5VT06 3117 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 AATKQ6ZMQ8 1374 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 OVOS2A0A0G2JMS6 1433 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 OVOS2A0A0J9YW53 1432 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 OVOS2Q6IE36 1432 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 CYP26A1O43174 497 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 HSPA6P17066 643 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms