RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 DUSP11O75319 330 aaKnown RBP4.25□□□□□ -1.73
PTPRC-213ENST00000529828 FGBP02675 491 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 CT47B1P0C2W7 299 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-213ENST00000529828 CDK8P49336 464 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 CDK7P50613 346 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 PSMC6P62333 389 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 ATP8B2P98198 1209 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 CCDC144BQ3MJ40 725 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 SPRED2Q7Z698 418 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 CERS3Q8IU89 383 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 HERVK_113Q902F9 699 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 ARHGAP45Q92619 1136 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 FGD4Q96M96 766 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 C1QTNF1Q9BXJ1 281 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 TRPV6Q9H1D0 765 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 HIPK3Q9H422 1215 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 RAVER2Q9HCJ3 691 aaKnown RBP4.25□□□□□ -1.73
PTPRC-213ENST00000529828 HOMER2Q9NSB8 354 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 HCN4Q9Y3Q4 1203 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 C5orf42Q9H799 3197 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 ELP1O95163 1332 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 TCRBV5S4A2TA0A5A2 114 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CTAGE5O15320 804 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ARHGEF15O94989 841 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CA3P07451 260 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 TTLL4Q14679 1199 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 TMEM63BQ5T3F8 832 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ARMCX2Q7L311 632 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 DEFB128Q7Z7B8 93 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ITPRIPQ8IWB1 547 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 PCSK9Q8NBP7 692 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ARNTL2Q8WYA1 636 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 KIFC2Q96AC6 838 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 SLF1Q9BQI6 1058 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 TEX13BQ9BXU2 312 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 WNT8AQ9H1J5 351 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 SPC25Q9HBM1 224 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 GOPCQ9HD26 462 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 SWAP70Q9UH65 585 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ISY1Q9ULR0 285 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ADAMTS5Q9UNA0 930 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 DIS3Q9Y2L1 958 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 SLC4A7Q9Y6M7 1214 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 GBF1Q92538 1859 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ASTN1O14525 1302 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 SYNGAP1Q96PV0 1343 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 PARP14Q460N5 1801 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 DNAJC25-GNG10A0A024R161 153 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 USP17L12C9JPN9 530 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 USP17L21D6R901 530 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 IPO8O15397 1037 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 B4GALT4O60513 344 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 NDUFB10O96000 172 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CD4P01730 458 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ATP2A2P16615 1042 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CST5P28325 142 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 PTPN5P54829 565 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 GJA9P57773 515 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CNTN2Q02246 1040 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 TMEM31Q5JXX7 168 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 EEPD1Q7L9B9 569 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ALYREFQ86V81 257 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CCDC144CPQ8IYA2 1237 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 NOC4LQ9BVI4 516 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 UPF3AQ9H1J1 476 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 MTIF3Q9H2K0 278 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 NOP58Q9Y2X3 529 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 CTDP1Q9Y5B0 961 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 MTCH2Q9Y6C9 303 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 ZNFX1Q9P2E3 1918 aaKnown RBP4.24□□□□□ -1.73
PTPRC-213ENST00000529828 GRIN2DO15399 1336 aa4.24□□□□□ -1.73
PTPRC-213ENST00000529828 BRWD1Q9NSI6 2320 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 CFAP54Q96N23 3096 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 ERC2O15083 957 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 DYNC1LI2O43237 492 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 GTPBP6O43824 516 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 CYP2C9P11712 490 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 RLBP1P12271 317 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 ITGA7Q13683 1181 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 C12orf60Q5U649 245 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 DMRTA1Q5VZB9 504 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 CEP85Q6P2H3 762 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 MAMDC4Q6UXC1 1216 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 C16orf86Q6ZW13 317 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 TLK2Q86UE8 772 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 FBXO16Q8IX29 292 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 LRRC47Q8N1G4 583 aaKnown RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 VWCEQ96DN2 955 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 KATNBL1Q9H079 304 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 C11orf16Q9NQ32 467 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 PDGFCQ9NRA1 345 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 TRMT13Q9NUP7 481 aaKnown RBP4.23□□□□□ -1.73
PTPRC-213ENST00000529828 SLC4A4Q9Y6R1 1079 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 MCM3APO60318 1980 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 F5H6K3 240 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 IGSF3O75054 1194 aa4.23□□□□□ -1.73
PTPRC-213ENST00000529828 ZBED4O75132 1171 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms