RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 MFSD5Q6N075 450 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 HAUS7Q99871 368 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 SLF1Q9BQI6 1058 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 ZHX1Q9UKY1 873 aaPredicted RBP10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 UMODL1Q5DID0 1318 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 IGKV6D-41A0A0C4DH26 115 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 DCDC2CA8MYV0 355 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 SMARCA5O60264 1052 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CST5P28325 142 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 ACVR2BQ13705 512 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 UBE3CQ15386 1083 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CCDC144BQ3MJ40 725 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CPXCR1Q8N123 301 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 PPM1EQ8WY54 764 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 TIFAQ96CG3 184 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 TEX13BQ9BXU2 312 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 UPF3AQ9H1J1 476 aaKnown RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 PRDM12Q9H4Q4 367 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 RAVER2Q9HCJ3 691 aaKnown RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 EPB41L4AQ9HCS5 686 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CXXC1Q9P0U4 656 aaPredicted RBP10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 CNPY2Q9Y2B0 182 aa10.21□□□□□ -0.77
TGFBR3-208ENST00000529608 ASTN1O14525 1302 aa10.21□□□□□ -0.78
TGFBR3-208ENST00000529608 SYNGAP1Q96PV0 1343 aa10.21□□□□□ -0.78
TGFBR3-208ENST00000529608 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 DUSP11O75319 330 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 C6orf222P0C671 652 aaPredicted RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 GJA9P57773 515 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 BEX3Q00994 111 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 CNTN2Q02246 1040 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 ZNF365Q70YC5 407 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 VWCEQ96DN2 955 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 STRBPQ96SI9 672 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 NYAP2Q9P242 653 aa10.2□□□□□ -0.78
TGFBR3-208ENST00000529608 ELP1O95163 1332 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 RBAK-RBAKDNI3L0D1 243 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 ARVCFO00192 962 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 PRDM1O75626 825 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 CD4P01730 458 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 CYP2C18P33260 490 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 LSM11P83369 360 aaKnown RBP eCLIP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 SBK1Q52WX2 424 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 ARMCX2Q7L311 632 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 CCDC144CPQ8IYA2 1237 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 OSBP2Q969R2 916 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 BACH2Q9BYV9 841 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 RWDD1Q9H446 243 aaPredicted RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 SLC38A10Q9HBR0 1119 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 ARPP21Q9UBL0 812 aaPredicted RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 CLIP2Q9UDT6 1046 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 DDX19BQ9UMR2 479 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 YBX2Q9Y2T7 364 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 SCN5AQ14524 2016 aa10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 TCF20Q9UGU0 1960 aaKnown RBP10.19□□□□□ -0.78
TGFBR3-208ENST00000529608 ZNF536O15090 1300 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 MINDY4BA8MYZ0 360 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 RAB11FIP3O75154 756 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 COL9A1P20849 921 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 COPB2P35606 906 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 NKX3-2P78367 333 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 CCDC85BQ15834 202 aaPredicted RBP10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 TSHZ3Q63HK5 1081 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 CCDC129Q6ZRS4 1044 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 CEP95Q96GE4 821 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
TGFBR3-208ENST00000529608 ABHD16BQ9H3Z7 469 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms