RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZNF467Q7Z7K2 595 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 TCEANC2Q96MN5 208 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 RIOX1Q9H6W3 641 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 PLXNA1Q9UIW2 1896 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 SOWAHBA6NEL2 793 aa18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 TNRC18O15417 2968 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 SNAI1O95863 264 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 CPA1P15085 419 aa18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 NUP133Q8WUM0 1156 aa18.78■□□□□ 0.6
TSPAN4-218ENST00000529566 ASTN1O14525 1302 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 PFASO15067 1338 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 CCDC69A6NI79 296 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 POTEB2H3BUK9 544 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 PPP1R11O60927 126 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 TFRCP02786 760 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 CAPN2P17655 700 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 MNX1P50219 401 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 JAKMIP1Q96N16 626 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 NRBP1Q9UHY1 535 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 OGDHLQ9ULD0 1010 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
TSPAN4-218ENST00000529566 SYNGAP1Q96PV0 1343 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 ZBTB5O15062 677 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 USH1GQ495M9 461 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 NSMFQ6X4W1 530 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 RGS22Q8NE09 1264 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 PURBQ96QR8 312 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 SLC12A7Q9Y666 1083 aa18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 BAZ2BQ9UIF8 2168 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-218ENST00000529566 DHX16O60231 1041 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 ZNF865P0CJ78 1059 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 RXRAP19793 462 aa18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 FBXO11Q86XK2 927 aa18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 FBXL16Q8N461 479 aa18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 PIGSQ96S52 555 aa18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-218ENST00000529566 OPLAHO14841 1288 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 SEPT4O43236 478 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 CALM1P0DP23 149 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 CALM2P0DP24 149 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 CALM3P0DP25 149 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 KIF5BP33176 963 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 APOA5Q6Q788 366 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 SLC30A10Q6XR72 485 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 CCDC144CPQ8IYA2 1237 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 SPZ1Q9BXG8 430 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 AGXT2Q9BYV1 514 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 MAF1Q9H063 256 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 KATNBL1Q9H079 304 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 LCTP09848 1927 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 ABCB11O95342 1321 aa18.74■□□□□ 0.59
TSPAN4-218ENST00000529566 PNMA6FA0A0J9YX94 578 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 PLEKHA8P1O95397 391 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 SEC24BO95487 1268 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 PSMA5P28066 241 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 CNGA1P29973 690 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 RPS6P62753 249 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 RNF207Q6ZRF8 634 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 ARMCX2Q7L311 632 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 MORC4Q8TE76 937 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 LZTS2Q9BRK4 669 aa18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-218ENST00000529566 PTPDC1A2A3K4 754 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 MSCO60682 206 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 FARP2O94887 1054 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 CASTP20810 708 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 GNAQP50148 359 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 Q6ZUG5 572 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 MICU3Q86XE3 530 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 ANKLE1Q8NAG6 615 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 TM6SF1Q9BZW5 370 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 MRPL11Q9Y3B7 192 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
TSPAN4-218ENST00000529566 GHRHRQ02643 423 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 FUT2Q10981 343 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 ACVR2BQ13705 512 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 RUFY3Q7L099 469 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 HOMER1Q86YM7 354 aa18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-218ENST00000529566 MCM3APO60318 1980 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms