RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 KATNBL1Q9H079 304 aa14.23□□□□□ -0.13
SORL1-208ENST00000529445 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
SORL1-208ENST00000529445 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
SORL1-208ENST00000529445 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
SORL1-208ENST00000529445 NEDD4P46934 1319 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 FRMPD2Q68DX3 1309 aaPredicted RBP14.22□□□□□ -0.13
SORL1-208ENST00000529445 SOWAHBA6NEL2 793 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 PDHBP11177 359 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 SLC16A2P36021 539 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 GJA9P57773 515 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 KCNA10Q16322 511 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 MUM1L1Q5H9M0 696 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 TTBK2Q6IQ55 1244 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 DEFB123Q8N688 67 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
SORL1-208ENST00000529445 MYH6P13533 1939 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 CDH23Q9H251 3354 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 TRIM43BA6NCK2 446 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 MYADML2A6NDP7 307 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 ADCY6O43306 1168 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 ZNF543Q08ER8 600 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.13
SORL1-208ENST00000529445 NSMFQ6X4W1 530 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 ANKRD33Q7Z3H0 272 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 SH3RF1Q7Z6J0 888 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 BADQ92934 168 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 TRIM43Q96BQ3 446 aaPredicted RBP14.21□□□□□ -0.13
SORL1-208ENST00000529445 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
SORL1-208ENST00000529445 ASTN1O14525 1302 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 ELP1O95163 1332 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 KIAA0355O15063 1070 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 ASGR1P07306 291 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 TNFAIP2Q03169 654 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
SORL1-208ENST00000529445 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 GPATCH4Q5T3I0 446 aaKnown RBP14.2□□□□□ -0.14
SORL1-208ENST00000529445 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
SORL1-208ENST00000529445 TOX2Q96NM4 488 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 ADD3Q9UEY8 706 aaKnown RBP14.2□□□□□ -0.14
SORL1-208ENST00000529445 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
SORL1-208ENST00000529445 SUPT16HQ9Y5B9 1047 aaKnown RBP14.2□□□□□ -0.14
SORL1-208ENST00000529445 WDR19Q8NEZ3 1342 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 LOC102724159A0A0B4J2E5 919 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 RAG1P15918 1043 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 NKX3-2P78367 333 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 PWP2Q15269 919 aaKnown RBP14.19□□□□□ -0.14
SORL1-208ENST00000529445 TLK2Q86UE8 772 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 VTA1Q9NP79 307 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 TMEM39AQ9NV64 488 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 UNC80Q8N2C7 3258 aa14.19□□□□□ -0.14
SORL1-208ENST00000529445 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
SORL1-208ENST00000529445 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.18□□□□□ -0.14
SORL1-208ENST00000529445 NFIBO00712 420 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 KDM4AO75164 1064 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 BAATQ14032 418 aaPredicted RBP14.18□□□□□ -0.14
SORL1-208ENST00000529445 SHHQ15465 462 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 Q7L0L9 218 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 FBXO16Q8IX29 292 aaPredicted RBP14.18□□□□□ -0.14
SORL1-208ENST00000529445 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 AP5M1Q9H0R1 490 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 KAT14Q9H8E8 782 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 CNNM2Q9H8M5 875 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 GNEQ9Y223 722 aaKnown RBP14.18□□□□□ -0.14
SORL1-208ENST00000529445 CUL9Q8IWT3 2517 aa14.18□□□□□ -0.14
SORL1-208ENST00000529445 RAD50Q92878 1312 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 PTPDC1A2A3K4 754 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 B4E1Z4 1266 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 CTAGE5O15320 804 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 ALDH5A1P51649 535 aaPredicted RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 FPGSQ05932 587 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 FSCN1Q16658 493 aaKnown RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 C9orf50Q5SZB4 431 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 IQSEC1Q6DN90 963 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 MORC4Q8TE76 937 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 ZSCAN10Q96SZ4 725 aaPredicted RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 MPHOSPH6Q99547 160 aaKnown RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 KRT23Q9C075 422 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 MTMR10Q9NXD2 777 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
SORL1-208ENST00000529445 EYSQ5T1H1 3165 aa14.17□□□□□ -0.14
SORL1-208ENST00000529445 ARVCFO00192 962 aa14.16□□□□□ -0.14
SORL1-208ENST00000529445 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
SORL1-208ENST00000529445 ZEB2O60315 1214 aa14.16□□□□□ -0.14
SORL1-208ENST00000529445 CABYRO75952 493 aa14.16□□□□□ -0.14
SORL1-208ENST00000529445 GOLGA8HP0CJ92 632 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms