RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CPNE8Q86YQ8 564 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 MKL1Q969V6 931 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 PLCD4Q9BRC7 762 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 SPATA9Q9BWV2 254 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 NKX2-4Q9H2Z4 354 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 CLEC1BQ9P126 229 aa7.12□□□□□ -1.27
CTR9-204ENST00000529355 BLACEA4D250 179 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 PSPNO60542 156 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 GDNFP39905 211 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
CTR9-204ENST00000529355 SIRT2Q8IXJ6 389 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 TMEM145Q8NBT3 493 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 KREMEN2Q8NCW0 462 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 COPS5Q92905 334 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 PTCHD1Q96NR3 888 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 JMJD8Q96S16 334 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 IER2Q9BTL4 223 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 EPN3Q9H201 632 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 BACE2Q9Y5Z0 518 aa7.11□□□□□ -1.27
CTR9-204ENST00000529355 PRODHO43272 600 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 DLX3O60479 287 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 PPP1R11O60927 126 aaPredicted RBP7.1□□□□□ -1.27
CTR9-204ENST00000529355 HPXP02790 462 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 SNRPB2P08579 225 aaKnown RBP7.1□□□□□ -1.27
CTR9-204ENST00000529355 PLS3P13797 630 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 L1CAMP32004 1257 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 GFRA1P56159 465 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 FAM209AQ5JX71 171 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 CEP128Q6ZU80 1094 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 CCDC103Q8IW40 242 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 OSBP2Q969R2 916 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 C1orf159Q96HA4 380 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 FCRL2Q96LA5 508 aaPredicted RBP7.1□□□□□ -1.27
CTR9-204ENST00000529355 CYP26B1Q9NR63 512 aa7.1□□□□□ -1.27
CTR9-204ENST00000529355 PAPLNO95428 1278 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 MSL3P1P0C860 447 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 KCNJ6P48051 423 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 INF2Q27J81 1249 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 POMZP3Q6PJE2 187 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 NPLOC4Q8TAT6 608 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 SHISA4Q96DD7 197 aa7.09□□□□□ -1.27
CTR9-204ENST00000529355 CARMIL2Q6F5E8 1435 aa7.09□□□□□ -1.28
CTR9-204ENST00000529355 LCP1P13796 627 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 SEPHS1P49903 392 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 RTP1P59025 263 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 IFRD2Q12894 506 aaPredicted RBP7.08□□□□□ -1.28
CTR9-204ENST00000529355 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 NTRK3Q16288 839 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 HSF5Q4G112 596 aaPredicted RBP7.08□□□□□ -1.28
CTR9-204ENST00000529355 RCSD1Q6JBY9 416 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 LRP10Q7Z4F1 713 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 SLCO6A1Q86UG4 719 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 NAT16Q8N8M0 369 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 PDZD8Q8NEN9 1154 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 SGSM3Q96HU1 749 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 EXOC2Q96KP1 924 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 AARSD1Q9BTE6 412 aaKnown RBP7.08□□□□□ -1.28
CTR9-204ENST00000529355 RNF32Q9H0A6 362 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 FBLN5Q9UBX5 448 aa7.08□□□□□ -1.28
CTR9-204ENST00000529355 AGRPO00253 132 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 PABPC1P11940 636 aaKnown RBP7.07□□□□□ -1.28
CTR9-204ENST00000529355 SDHBP21912 280 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 HOXC12P31275 282 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 DUSP4Q13115 394 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
CTR9-204ENST00000529355 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
CTR9-204ENST00000529355 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 MYLIPQ8WY64 445 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 MRFAP1L1Q96HT8 127 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 KCNK12Q9HB15 430 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 TNFRSF10DQ9UBN6 386 aa7.07□□□□□ -1.28
CTR9-204ENST00000529355 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.06□□□□□ -1.28
CTR9-204ENST00000529355 SCG5P05408 212 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 SQSTM1Q13501 440 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 NFE2L2Q16236 605 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 EEF1DP3Q658K8 133 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 GIMAP6Q6P9H5 292 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 NSMFQ6X4W1 530 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 JAZF1Q86VZ6 243 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 LRRC47Q8N1G4 583 aaKnown RBP7.06□□□□□ -1.28
CTR9-204ENST00000529355 CRACR2BQ8N4Y2 399 aaPredicted RBP7.06□□□□□ -1.28
CTR9-204ENST00000529355 ABHD4Q8TB40 342 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 SYTL4Q96C24 671 aaPredicted RBP7.06□□□□□ -1.28
CTR9-204ENST00000529355 IMPACTQ9P2X3 320 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 FBXL7Q9UJT9 491 aa7.06□□□□□ -1.28
CTR9-204ENST00000529355 TRAV20A0A0B4J274 112 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 IQCA1LA6NCM1 817 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 NRDCO43847 1150 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 MSCO60682 206 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 ITGB5P18084 799 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 KIR2DL1P43626 348 aaPredicted RBP7.05□□□□□ -1.28
CTR9-204ENST00000529355 KIR2DL2P43627 348 aaPredicted RBP7.05□□□□□ -1.28
CTR9-204ENST00000529355 MVKQ03426 396 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
CTR9-204ENST00000529355 KRTAP5-3Q6L8H2 238 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms