RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 PLS1Q14651 629 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 KIF22Q14807 665 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 PFKFB3Q16875 520 aaPredicted RBP16.65■□□□□ 0.26
UBXN1-209ENST00000528907 PRPF38BQ5VTL8 546 aaKnown RBP16.65■□□□□ 0.26
UBXN1-209ENST00000528907 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
UBXN1-209ENST00000528907 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
UBXN1-209ENST00000528907 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 DEXIO95424 95 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 CTGFP29279 349 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
UBXN1-209ENST00000528907 CUL4AQ13619 759 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 PKN1Q16512 942 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 PPP1R18Q6NYC8 613 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
UBXN1-209ENST00000528907 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 ACAD9Q9H845 621 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
UBXN1-209ENST00000528907 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
UBXN1-209ENST00000528907 MRPL11Q9Y3B7 192 aaKnown RBP16.64■□□□□ 0.25
UBXN1-209ENST00000528907 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
UBXN1-209ENST00000528907 ALAS1P13196 640 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 SCG2P13521 617 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PTPREP23469 700 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PSMC4P43686 418 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PRMT2P55345 433 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 GRB14Q14449 540 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PHKBQ93100 1093 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
UBXN1-209ENST00000528907 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
UBXN1-209ENST00000528907 SLC15A5A6NIM6 579 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
UBXN1-209ENST00000528907 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
UBXN1-209ENST00000528907 MORN1Q5T089 497 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
UBXN1-209ENST00000528907 CD99L2Q8TCZ2 262 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 SOCS4Q8WXH5 440 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 USP6NLQ92738 828 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 SH3GLB2Q9NR46 395 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 BARHL2Q9NY43 387 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 GJD2Q9UKL4 321 aa16.62■□□□□ 0.25
UBXN1-209ENST00000528907 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
UBXN1-209ENST00000528907 FCER1AP12319 257 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 HOXD10P28358 340 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 HMGN5P82970 282 aaKnown RBP16.61■□□□□ 0.25
UBXN1-209ENST00000528907 CAP1Q01518 475 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 WWC2Q6AWC2 1192 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 WASF1Q92558 559 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 COA7Q96BR5 231 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 PFASO15067 1338 aa16.61■□□□□ 0.25
UBXN1-209ENST00000528907 DNAJC25-GNG10A0A024R161 153 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 ESYT2A0FGR8 921 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 STXBP3O00186 592 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 OPLAHO14841 1288 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 HOXC6P09630 235 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
UBXN1-209ENST00000528907 IRF5Q13568 498 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 KCTD2Q14681 263 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 USH1GQ495M9 461 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-209ENST00000528907 INTS4Q96HW7 963 aaKnown RBP16.6■□□□□ 0.25
UBXN1-209ENST00000528907 MMP19Q99542 508 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
UBXN1-209ENST00000528907 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
UBXN1-209ENST00000528907 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
UBXN1-209ENST00000528907 LCTP09848 1927 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 DOCK3Q8IZD9 2030 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 XRCC5P13010 732 aaKnown RBP16.59■□□□□ 0.25
UBXN1-209ENST00000528907 HSD17B4P51659 736 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-209ENST00000528907 SRRDQ9UH36 339 aa16.59■□□□□ 0.25
UBXN1-209ENST00000528907 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-209ENST00000528907 LOC102724159A0A0B4J2E5 919 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms