RNA–Protein interactions for RNA: ENST00000528856.5

CAPRIN1-205, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-205ENST00000528856 APOA5Q6Q788 366 aa27.34■■□□□ 1.97
CAPRIN1-205ENST00000528856 CCDC144CPQ8IYA2 1237 aa27.34■■□□□ 1.97
CAPRIN1-205ENST00000528856 CLEC4DQ8WXI8 215 aa27.34■■□□□ 1.97
CAPRIN1-205ENST00000528856 ZSWIM6Q9HCJ5 1215 aa27.34■■□□□ 1.97
CAPRIN1-205ENST00000528856 NFIBO00712 420 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 PLEKHA8P1O95397 391 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 KIF5BP33176 963 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 FGD4Q96M96 766 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 PIGSQ96S52 555 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 TM6SF1Q9BZW5 370 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.33■■□□□ 1.972e-6■□□□□ 9.2
CAPRIN1-205ENST00000528856 PAK6Q9NQU5 681 aaPredicted RBP27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 RPTORQ8N122 1335 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 LCTP09848 1927 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 BRCA2P51587 3418 aa27.33■■□□□ 1.97
CAPRIN1-205ENST00000528856 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 NSMFQ6X4W1 530 aa27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 RUFY3Q7L099 469 aa27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 MICU3Q86XE3 530 aa27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 FBXO11Q86XK2 927 aa27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 FANCBQ8NB91 859 aa27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 HMX1Q9NP08 348 aaPredicted RBP27.32■■□□□ 1.96
CAPRIN1-205ENST00000528856 KLF18A0A0U1RQI7 1052 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 ZBTB5O15062 677 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 PPP1R11O60927 126 aaPredicted RBP27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 GJB1P08034 283 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 FGD1P98174 961 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 CNTN2Q02246 1040 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 SYNE3Q6ZMZ3 975 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 FBXL16Q8N461 479 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 FAM133AQ8N9E0 248 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 BRF1Q92994 677 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 AGXT2Q9BYV1 514 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 CYP39A1Q9NYL5 469 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 PFASO15067 1338 aa27.31■■□□□ 1.96
CAPRIN1-205ENST00000528856 POTEB2H3BUK9 544 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 EN2P19622 333 aaPredicted RBP27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 APOBRQ0VD83 1088 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 HOMER1Q86YM7 354 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 SRBD1Q8N5C6 995 aaKnown RBP27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 TRPV1Q8NER1 839 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 TINF2Q9BSI4 451 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 SPZ1Q9BXG8 430 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 ABCB11O95342 1321 aa27.3■■□□□ 1.96
CAPRIN1-205ENST00000528856 ZBTB43O43298 467 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 CYBAP13498 195 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 SMARCA1P28370 1054 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 GNAQP50148 359 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 BAATQ14032 418 aaPredicted RBP27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 CMTR1Q8N1G2 835 aaKnown RBP27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 DEFB118Q96PH6 123 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 LZTS2Q9BRK4 669 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 AMNQ9BXJ7 453 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 UPF3BQ9BZI7 483 aaKnown RBP27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 CYP46A1Q9Y6A2 500 aa27.29■■□□□ 1.96
CAPRIN1-205ENST00000528856 SOWAHBA6NEL2 793 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 GJA8P48165 433 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 RGS19P49795 217 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 ANAPC15P60006 121 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 PRAMEF19Q5SWL8 479 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 TMTC3Q6ZXV5 915 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 ZNF467Q7Z7K2 595 aaPredicted RBP27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 U2AF1L4Q8WU68 220 aaKnown RBP27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 PIBF1Q8WXW3 757 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 SHISA4Q96DD7 197 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 PURBQ96QR8 312 aaKnown RBP27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 MCM3APO60318 1980 aa27.28■■□□□ 1.96
CAPRIN1-205ENST00000528856 ASTN1O14525 1302 aa27.27■■□□□ 1.96
CAPRIN1-205ENST00000528856 MAMDC4Q6UXC1 1216 aa27.27■■□□□ 1.96
CAPRIN1-205ENST00000528856 SLC30A10Q6XR72 485 aa27.27■■□□□ 1.96
CAPRIN1-205ENST00000528856 IL17RAQ96F46 866 aa27.27■■□□□ 1.96
CAPRIN1-205ENST00000528856 PNMA6FA0A0J9YX94 578 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 PTPDC1A2A3K4 754 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 GOLGA8AA7E2F4 631 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 GOLGA8BA8MQT2 603 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 SGPL1O95470 568 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 TOB2Q14106 344 aaPredicted RBP27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 RNF207Q6ZRF8 634 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 MSL3Q8N5Y2 521 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 RGS22Q8NE09 1264 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 TBC1D5Q92609 795 aa27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 FAM217BQ9NTX9 383 aaPredicted RBP27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 MRPL11Q9Y3B7 192 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-205ENST00000528856 SYNGAP1Q96PV0 1343 aa27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 SNAI1O95863 264 aaPredicted RBP27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 RCAN1P53805 252 aa27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 RPS6P62753 249 aaKnown RBP27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 RTN1Q16799 776 aa27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 RBM28Q9NW13 759 aaKnown RBP27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 NAP1L2Q9ULW6 460 aaPredicted RBP27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 PCDHA1Q9Y5I3 950 aa27.25■■□□□ 1.95
CAPRIN1-205ENST00000528856 OPLAHO14841 1288 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 CALML3P27482 149 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 CDC27P30260 824 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 CCDC82Q8N4S0 544 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 RRP36Q96EU6 259 aaKnown RBP27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 CRISPLD2Q9H0B8 497 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 FRMPD3Q5JV73 1810 aa27.24■■□□□ 1.95
CAPRIN1-205ENST00000528856 CNGA1P29973 690 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms