RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	ASB14	A6NK59	587 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ERC2	O15083	957 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PTGS1	P23219	599 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CTDSPL2	Q05D32	466 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ZMYM1	Q5SVZ6	1142 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	EEPD1	Q7L9B9	569 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	GMCL1	Q96IK5	515 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PDGFC	Q9NRA1	345 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	STX8	Q9UNK0	236 aa		13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	LAMA2	P24043	3122 aa	Known RBP	13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ASTN1	O14525	1302 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TTC41P	Q6P2S7	1318 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TSPY2	A6NKD2	308 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	NMT2	O60551	498 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CD4	P01730	458 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FGB	P02675	491 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SMPD1	P17405	629 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	NKX3-2	P78367	333 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ITGA7	Q13683	1181 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FSCN1	Q16658	493 aa	Known RBP	13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TKFC	Q3LXA3	575 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MUM1L1	Q5H9M0	696 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TMEM63B	Q5T3F8	832 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	IQSEC1	Q6DN90	963 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	USP38	Q8NB14	1042 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PI4K2B	Q8TCG2	481 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SYMPK	Q92797	1274 aa	Known RBP	13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PURB	Q96QR8	312 aa	Known RBP	13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PBX4	Q9BYU1	374 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	IL17RB	Q9NRM6	502 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PRR12	Q9ULL5	1215 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	GNE	Q9Y223	722 aa	Known RBP	13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PCDHB15	Q9Y5E8	787 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MYH4	Q9Y623	1939 aa		13.48	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ZEB2	O60315	1214 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	RANBP6	O60518	1105 aa	Known RBP	13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PLA2G6	O60733	806 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PPP4R3B	Q5MIZ7	849 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	RASIP1	Q5U651	963 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	KIAA1211	Q6ZU35	1233 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TRPV6	Q9H1D0	765 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PRDM12	Q9H4Q4	367 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	IL23A	Q9NPF7	189 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PRDM6	Q9NQX0	595 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	UNC80	Q8N2C7	3258 aa		13.47	□□□□□ -0.25
PTP4A2-211	ENST00000528840	GRIN2D	O15399	1336 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CABYR	O75952	493 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CCL23	P55773	120 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PSMC6	P62333	389 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TTBK2	Q6IQ55	1244 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TAPT1	Q6NXT6	567 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	NSMF	Q6X4W1	530 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	OTOP2	Q7RTS6	562 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TLK2	Q86UE8	772 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SLC43A3	Q8NBI5	491 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	HERVK_113	Q902F9	699 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	GAS2L1	Q99501	681 aa	Predicted RBP	13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	HIPK3	Q9H422	1215 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CYP39A1	Q9NYL5	469 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MSRA	Q9UJ68	235 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CCPG1	Q9ULG6	757 aa		13.46	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MCM3AP	O60318	1980 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	UMODL1	Q5DID0	1318 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SLC16A2	P36021	539 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	BAAT	Q14032	418 aa	Predicted RBP	13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	CCDC85B	Q15834	202 aa	Predicted RBP	13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	CCDC96	Q2M329	555 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	VPS53	Q5VIR6	699 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RASGRP2	Q7LDG7	609 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	FBXO16	Q8IX29	292 aa	Predicted RBP	13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.45	□□□□□ -0.26	7e-9	■■■■■ 28
PTP4A2-211	ENST00000528840	PLIN4	Q96Q06	1357 aa		13.45	□□□□□ -0.26
PTP4A2-211	ENST00000528840	FOXP2	O15409	715 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	B4GALT4	O60513	344 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	MX1	P20591	662 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	IGFBP4	P22692	258 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TJAP1	Q5JTD0	557 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ANKRD45	Q5TZF3	282 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	MTIF3	Q9H2K0	278 aa	Known RBP	13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	NKX2-4	Q9H2Z4	354 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	GPCPD1	Q9NPB8	672 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TOMM22	Q9NS69	142 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840		Q9Y3F1	56 aa		13.44	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ICAM1	P05362	532 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RABGGTB	P53611	331 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RAB30	Q15771	203 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RRP12	Q5JTH9	1297 aa	Known RBP	13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RPUSD2	Q8IZ73	545 aa	Known RBP	13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	DCAF4	Q8WV16	495 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	NOC4L	Q9BVI4	516 aa	Known RBP	13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SEZ6L	Q9BYH1	1024 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	WDR11	Q9BZH6	1224 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SLC28A3	Q9HAS3	691 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	VTA1	Q9NP79	307 aa		13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ADD3	Q9UEY8	706 aa	Known RBP	13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.43	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ANAPC4	Q9UJX5	808 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms