RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLURP2P0DP57 97 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 BAG6P46379 1132 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 GRAPQ13588 217 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 E2F4Q16254 413 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 MB21D1Q8N884 522 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 GRAPLQ8TC17 118 aaPredicted RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 EEF2KMTQ96G04 330 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 PLIN2Q99541 437 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 HINFPQ9BQA5 517 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 GNL3LQ9NVN8 582 aaKnown RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 ZNHIT6Q9NWK9 470 aaKnown RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 SCAF8Q9UPN6 1271 aaKnown RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 CALM1P0DP23 149 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 CALM2P0DP24 149 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 CALM3P0DP25 149 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 HIBADHP31937 336 aaKnown RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 FUT2Q10981 343 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 PDXDC2PQ6P474 469 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 CTR9Q6PD62 1173 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 TRAPPC11Q7Z392 1133 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 TRIM47Q96LD4 638 aa14□□□□□ -0.17
CAPN1-208ENST00000527323 MKRN1Q9UHC7 482 aaKnown RBP14□□□□□ -0.17
CAPN1-208ENST00000527323 KRT86O43790 486 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 KRT83P78385 493 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 STIM1Q13586 685 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 LRRC31Q6UY01 552 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 TRIM21P19474 475 aaKnown RBP13.99□□□□□ -0.17
CAPN1-208ENST00000527323 RIN2Q8WYP3 895 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-208ENST00000527323 JAKMIP2Q96AA8 810 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 TROAPQ12815 778 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 TMTC3Q6ZXV5 915 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
CAPN1-208ENST00000527323 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
CAPN1-208ENST00000527323 PSMD14O00487 310 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 C21orf2O43822 256 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 CKAP4Q07065 602 aaKnown RBP13.98□□□□□ -0.17
CAPN1-208ENST00000527323 IL17AQ16552 155 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 MACROD2A1Z1Q3 448 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-208ENST00000527323 FAM47AQ5JRC9 791 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
CAPN1-208ENST00000527323 TNFRSF25Q93038 417 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 MTMR7Q9Y216 660 aa13.98□□□□□ -0.17
CAPN1-208ENST00000527323 B4DLN1 442 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 EIF3CLB5ME19 914 aaKnown RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 NMT2O60551 498 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 SCG2P13521 617 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 HERVK_113P62684 666 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 NPY5RQ15761 445 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 IRF2BP1Q8IU81 584 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 EIF3CQ99613 913 aaKnown RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 PCDHAC2Q9Y5I4 1007 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 BAZ2BQ9UIF8 2168 aaKnown RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 COL1A1P02452 1464 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 USP17L21D6R901 530 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 PSMA7O14818 248 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 SYF2O95926 243 aaKnown RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 SRGNP10124 158 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 VEGFAP15692 232 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
CAPN1-208ENST00000527323 CCDC70Q6NSX1 233 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 VIPAS39Q9H9C1 493 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 ECM29Q5VYK3 1845 aa13.97□□□□□ -0.17
CAPN1-208ENST00000527323 ZNF185O15231 689 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 RPS6KA5O75582 802 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 IDEP14735 1019 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 UBA7P41226 1012 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 SCNN1DP51172 638 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 GTF2IP78347 998 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 ADSSL1Q8N142 457 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
CAPN1-208ENST00000527323 AGPAT5Q9NUQ2 364 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 ANAPC4Q9UJX5 808 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 CAPN11Q9UMQ6 739 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-208ENST00000527323 GGCXP38435 758 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 TRAPPC10P48553 1259 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 COG1Q8WTW3 980 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
CAPN1-208ENST00000527323 G3V3G9 751 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.18
CAPN1-208ENST00000527323 DNM2P50570 870 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 WDR59Q6PJI9 974 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 RASGRP4Q8TDF6 673 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 DNAJC7Q99615 494 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms