RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 IQUBQ8NA54 791 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 PCDHA1Q9Y5I3 950 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 FOXN1O15353 648 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 AP5Z1O43299 807 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 ECE1P42892 770 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 SYDE2Q5VT97 1194 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 DHX40Q8IX18 779 aaKnown RBP18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 NEMFO60524 1076 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 EGFRP00533 1210 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 PRELPP51888 382 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 SMARCE1Q969G3 411 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 AMNQ9BXJ7 453 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
SNRNP35-204ENST00000527158 A0A087X0B3 334 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 SMC2O95347 1197 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 ASNSP08243 561 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 SPICE1Q8N0Z3 855 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 TRIM5Q9C035 493 aa18.36■□□□□ 0.53
SNRNP35-204ENST00000527158 SMTNL1A8MU46 457 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 NT5DC1Q5TFE4 455 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 H7C1D1 291 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 STAT2P52630 851 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 TPM4P67936 248 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 PAGE5Q96GU1 130 aa18.35■□□□□ 0.53
SNRNP35-204ENST00000527158 UBE2SQ16763 222 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 TRIML1Q8N9V2 468 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 SCAF8Q9UPN6 1271 aaKnown RBP18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 PRR29P0C7W0 189 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 UBA7P41226 1012 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 SARSP49591 514 aaKnown RBP18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 GRAMD1CQ8IYS0 662 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 AK8Q96MA6 479 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 TEPSINQ96N21 525 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
SNRNP35-204ENST00000527158 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
SNRNP35-204ENST00000527158 AFMP43652 599 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 TRAF1Q13077 416 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 SARM1Q6SZW1 724 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 SH3RF1Q7Z6J0 888 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 TTC12Q9H892 705 aaPredicted RBP18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 MAN1B1Q9UKM7 699 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.52
SNRNP35-204ENST00000527158 E2F4Q16254 413 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 MCTP2Q6DN12 878 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 SPATA20Q8TB22 786 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 KIAA1524Q8TCG1 905 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 CHURC1Q8WUH1 139 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 DEFB129Q9H1M3 183 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 DACH1Q9UI36 760 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 LMNB1P20700 586 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 CDC25AP30304 524 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 ZNF75DP51815 510 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 PPP4R3AQ6IN85 833 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 CCSER1Q9C0I3 900 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
SNRNP35-204ENST00000527158 IKBKBO14920 756 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 STAT6P42226 847 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 SNAP25P60880 206 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 CALCRLQ16602 461 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 PLA2G4DQ86XP0 818 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 MLKLQ8NB16 471 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 MORC3Q14149 939 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USH1GQ495M9 461 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 KIAA1755Q5JYT7 1200 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 RRAGBQ5VZM2 374 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
SNRNP35-204ENST00000527158 GSDMAQ96QA5 445 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms