RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
PKP3-204ENST00000526971 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.17
PKP3-204ENST00000526971 LRRC37A2A6NM11 1700 aa22.39■■□□□ 1.17
PKP3-204ENST00000526971 PLA2G6O60733 806 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 ZBED4O75132 1171 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 ACLYP53396 1101 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 FAAP100Q0VG06 881 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 TRDNQ13061 729 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 CCSAPQ6IQ19 270 aaPredicted RBP22.38■■□□□ 1.17
PKP3-204ENST00000526971 KCTD1Q719H9 257 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 FAM160B2Q86V87 743 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 KLHDC9Q8NEP7 349 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 MAFAQ8NHW3 353 aaPredicted RBP22.38■■□□□ 1.17
PKP3-204ENST00000526971 CHURC1Q8WUH1 139 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 RNPC3Q96LT9 517 aaKnown RBP22.38■■□□□ 1.17
PKP3-204ENST00000526971 MTMR7Q9Y216 660 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 TAF6LQ9Y6J9 622 aa22.38■■□□□ 1.17
PKP3-204ENST00000526971 SYNGAP1Q96PV0 1343 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 RAG1P15918 1043 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 STAT2P52630 851 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 MAMDC4Q6UXC1 1216 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 RASGRP2Q7LDG7 609 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 MSL3Q8N5Y2 521 aaKnown RBP22.37■■□□□ 1.17
PKP3-204ENST00000526971 TSEN34Q9BSV6 310 aaKnown RBP22.37■■□□□ 1.17
PKP3-204ENST00000526971 SLC38A10Q9HBR0 1119 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 ANO2Q9NQ90 1003 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
PKP3-204ENST00000526971 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
PKP3-204ENST00000526971 MYO9BQ13459 2157 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 LCTP09848 1927 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 E7EWF7 191 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 ATP2A1O14983 1001 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 FDX1P10109 184 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 CCDC96Q2M329 555 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 ANKRD33Q7Z3H0 272 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
PKP3-204ENST00000526971 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
PKP3-204ENST00000526971 STARD7Q9NQZ5 370 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 TMEM39AQ9NV64 488 aa22.36■■□□□ 1.17
PKP3-204ENST00000526971 CTDP1Q9Y5B0 961 aaPredicted RBP22.36■■□□□ 1.17
PKP3-204ENST00000526971 SLC4A3P48751 1232 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 FPGSQ05932 587 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
PKP3-204ENST00000526971 KCNA10Q16322 511 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 STOX1Q6ZVD7 989 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 CYB5R4Q7L1T6 521 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.35■■□□□ 1.17
PKP3-204ENST00000526971 DDX11Q96FC9 970 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 FAM184BQ9ULE4 1060 aa22.35■■□□□ 1.17
PKP3-204ENST00000526971 TNKSO95271 1327 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 PDHBP11177 359 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 NECTIN1Q15223 517 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 ZNF467Q7Z7K2 595 aaPredicted RBP22.34■■□□□ 1.17
PKP3-204ENST00000526971 RALYLQ86SE5 291 aaKnown RBP22.34■■□□□ 1.17
PKP3-204ENST00000526971 NCOA7Q8NI08 942 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 TOX2Q96NM4 488 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 KAT14Q9H8E8 782 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.34■■□□□ 1.17
PKP3-204ENST00000526971 TBX21Q9UL17 535 aa22.34■■□□□ 1.17
PKP3-204ENST00000526971 GBF1Q92538 1859 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 MOXD2PA6NHM9 499 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 SLC27A2O14975 620 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 DUSP11O75319 330 aaKnown RBP22.33■■□□□ 1.17
PKP3-204ENST00000526971 CST5P28325 142 aaPredicted RBP22.33■■□□□ 1.17
PKP3-204ENST00000526971 OAZ1P54368 228 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 TTBK2Q6IQ55 1244 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 PNMA1Q8ND90 353 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 PRR12Q9ULL5 1215 aa22.33■■□□□ 1.17
PKP3-204ENST00000526971 FRMPD2Q68DX3 1309 aaPredicted RBP22.32■■□□□ 1.16
PKP3-204ENST00000526971 LAMA4Q16363 1823 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 FOSL2P15408 326 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 ZNF543Q08ER8 600 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 ACVR2BQ13705 512 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 SEC23AQ15436 765 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 CREB3L3Q68CJ9 461 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 KATNBL1Q9H079 304 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 UPF3AQ9H1J1 476 aaKnown RBP22.32■■□□□ 1.16
PKP3-204ENST00000526971 GPCPD1Q9NPB8 672 aa22.32■■□□□ 1.16
PKP3-204ENST00000526971 DCDC2CA8MYV0 355 aa22.31■■□□□ 1.16
PKP3-204ENST00000526971 CCDC144BQ3MJ40 725 aa22.31■■□□□ 1.16
PKP3-204ENST00000526971 IFIT1BQ5T764 474 aaKnown RBP22.31■■□□□ 1.16
PKP3-204ENST00000526971 ARMCX2Q7L311 632 aa22.31■■□□□ 1.16
PKP3-204ENST00000526971 NUP133Q8WUM0 1156 aa22.31■■□□□ 1.16
PKP3-204ENST00000526971 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.31■■□□□ 1.165e-14■□□□□ 11
PKP3-204ENST00000526971 CHD9Q3L8U1 2897 aa22.31■■□□□ 1.16
PKP3-204ENST00000526971 TMEM265A0A087WTH1 108 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 CTAGE5O15320 804 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 TIMP1P01033 207 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 ASGR1P07306 291 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 C6orf222P0C671 652 aaPredicted RBP22.3■■□□□ 1.16
PKP3-204ENST00000526971 DNAJB2P25686 324 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 SLC16A2P36021 539 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 CDK7P50613 346 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 GRIN2CQ14957 1233 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 SYDE2Q5VT97 1194 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 MB21D2Q8IYB1 491 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms