RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
SSRP1-203ENST00000526696 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
SSRP1-203ENST00000526696 EPG5Q9HCE0 2579 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 KMT2EQ8IZD2 1858 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 PPP1R13LQ8WUF5 828 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 SLF1Q9BQI6 1058 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSRP1-203ENST00000526696 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 FAM86C1Q9NVL1 165 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 MUTYHQ9UIF7 546 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 DBNLQ9UJU6 430 aaKnown RBP16.37■□□□□ 0.21
SSRP1-203ENST00000526696 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
SSRP1-203ENST00000526696 PLXNA3P51805 1871 aa16.37■□□□□ 0.21
SSRP1-203ENST00000526696 TPRP12270 2363 aaKnown RBP16.36■□□□□ 0.21
SSRP1-203ENST00000526696 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 RFC2P35250 354 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 WDR5P61964 334 aaKnown RBP16.36■□□□□ 0.21
SSRP1-203ENST00000526696 DEFB103AP81534 67 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 GPNMBQ14956 572 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 PUS10Q3MIT2 529 aaKnown RBP16.36■□□□□ 0.21
SSRP1-203ENST00000526696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSRP1-203ENST00000526696 AP5M1Q9H0R1 490 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
SSRP1-203ENST00000526696 SWAP70Q9UH65 585 aa16.36■□□□□ 0.21
SSRP1-203ENST00000526696 LINC01553A4QN01 128 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 SOWAHBA6NEL2 793 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 TCTN1Q2MV58 587 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 ADHFE1Q8IWW8 467 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
SSRP1-203ENST00000526696 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
SSRP1-203ENST00000526696 PRKAG3Q9UGI9 489 aa16.35■□□□□ 0.21
SSRP1-203ENST00000526696 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 RAD21O60216 631 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 ZEB2O60315 1214 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 HERC4Q5GLZ8 1057 aaPredicted RBP16.34■□□□□ 0.21
SSRP1-203ENST00000526696 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 GOPCQ9HD26 462 aa16.34■□□□□ 0.21
SSRP1-203ENST00000526696 LCTP09848 1927 aa16.33■□□□□ 0.21
SSRP1-203ENST00000526696 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
SSRP1-203ENST00000526696 CYP2D7A0A087X1C5 515 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 CDK8P49336 464 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 BMP8AQ7Z5Y6 402 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.2
SSRP1-203ENST00000526696 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
SSRP1-203ENST00000526696 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
SSRP1-203ENST00000526696 VPS13AQ96RL7 3174 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 GJB5O95377 273 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 GNAI3P08754 354 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 KCNJ6P48051 423 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 PURAQ00577 322 aaKnown RBP16.32■□□□□ 0.2
SSRP1-203ENST00000526696 EEPD1Q7L9B9 569 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 FBXO16Q8IX29 292 aaPredicted RBP16.32■□□□□ 0.2
SSRP1-203ENST00000526696 LCORLQ8N3X6 602 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 C17orf80Q9BSJ5 609 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 ZBED2Q9BTP6 218 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 Q9Y3F1 56 aa16.32■□□□□ 0.2
SSRP1-203ENST00000526696 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 RNF135Q8IUD6 432 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
SSRP1-203ENST00000526696 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 CHST13Q8NET6 341 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 EDAQ92838 391 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
SSRP1-203ENST00000526696 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
SSRP1-203ENST00000526696 RAD9AQ99638 391 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
SSRP1-203ENST00000526696 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-203ENST00000526696 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 NCOR2Q9Y618 2525 aa16.31■□□□□ 0.2
SSRP1-203ENST00000526696 PRKAB2O43741 272 aa16.3■□□□□ 0.2
SSRP1-203ENST00000526696 LTBRP36941 435 aa16.3■□□□□ 0.2
SSRP1-203ENST00000526696 IQSEC1Q6DN90 963 aa16.3■□□□□ 0.2
SSRP1-203ENST00000526696 EAF2Q96CJ1 260 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-203ENST00000526696 UPF3BQ9BZI7 483 aaKnown RBP16.3■□□□□ 0.2
SSRP1-203ENST00000526696 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
SSRP1-203ENST00000526696 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
SSRP1-203ENST00000526696 FBXO40Q9UH90 709 aa16.3■□□□□ 0.2
SSRP1-203ENST00000526696 TMEM221A6NGB7 291 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 M0R296 226 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 ZBED4O75132 1171 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 NDUFB10O96000 172 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 PDE6AP16499 860 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 TCEAL5Q5H9L2 206 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 FAM47CQ5HY64 1035 aa16.29■□□□□ 0.2
SSRP1-203ENST00000526696 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-203ENST00000526696 C16orf86Q6ZW13 317 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms