RNA–Protein interactions for RNA: ENST00000526564.1

PPP1R16A-204, Transcript of protein phosphatase 1 regulatory subunit 16A, human

TSL 5

Gene PPP1R16A, Length 675 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R16A-204	ENST00000526564	DHX16	O60231	1041 aa	Known RBP	28.45	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	MCM5	P33992	734 aa		28.45	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	VAT1L	Q9HCJ6	419 aa		28.45	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	28.45	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	FRMPD3	Q5JV73	1810 aa		28.45	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	PALM3	A6NDB9	673 aa	Predicted RBP	28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	KRT32	Q14532	448 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	GRM4	Q14833	912 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	USH1G	Q495M9	461 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ARMCX2	Q7L311	632 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	JMJD4	Q9H9V9	463 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	LY9	Q9HBG7	655 aa		28.44	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ASTN1	O14525	1302 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	KLRF2	D3W0D1	207 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	TROAP	Q12815	778 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	BAAT	Q14032	418 aa	Predicted RBP	28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	CCDC144CP	Q8IYA2	1237 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	KCNB2	Q92953	911 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	TMEM87B	Q96K49	555 aa		28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	PURB	Q96QR8	312 aa	Known RBP	28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ZHX1	Q9UKY1	873 aa	Predicted RBP	28.43	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	COL6A1	P12109	1028 aa		28.42	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	QRICH1	Q2TAL8	776 aa		28.42	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	CATIP	Q7Z7H3	387 aa		28.42	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	PTPDC1	A2A3K4	754 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	SH2B2	O14492	632 aa	Predicted RBP	28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	AKR1A1	P14550	325 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	HSPA4	P34932	840 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ACVR2B	Q13705	512 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	SLC30A10	Q6XR72	485 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	RASEF	Q8IZ41	740 aa		28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	LENG1	Q96BZ8	264 aa	Predicted RBP	28.41	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	DNM1L	O00429	736 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	RARB	P10826	455 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	GJC2	Q5T442	439 aa	Predicted RBP	28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	RNF207	Q6ZRF8	634 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	TMTC2	Q8N394	836 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ARRDC4	Q8NCT1	418 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	NUP133	Q8WUM0	1156 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	NEK1	Q96PY6	1258 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ABHD16B	Q9H3Z7	469 aa		28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	DDX49	Q9Y6V7	483 aa	Known RBP	28.4	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ASB14	A6NK59	587 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	MYCN	P04198	464 aa	Predicted RBP	28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	SLC35G1	Q2M3R5	365 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ZNF654	Q8IZM8	581 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	MYL10	Q9BUA6	226 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	LRRC2	Q9BYS8	371 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	KATNBL1	Q9H079	304 aa		28.39	■■■□□ 2.14
PPP1R16A-204	ENST00000526564	ABCB11	O95342	1321 aa		28.39	■■■□□ 2.13
PPP1R16A-204	ENST00000526564		H0YGN5	161 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	EVI5	O60447	810 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	HMGB1	P09429	215 aa	Known RBP	28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	CALML3	P27482	149 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	LIFR	P42702	1097 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	RPS6	P62753	249 aa	Known RBP	28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	NFXL1	Q6ZNB6	911 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	FBXO11	Q86XK2	927 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	MTMR8	Q96EF0	704 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	XPNPEP3	Q9NQH7	507 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	FAM184B	Q9ULE4	1060 aa		28.38	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	MCM3AP	O60318	1980 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	EIF5B	O60841	1220 aa	Known RBP	28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	DDAH1	O94760	285 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	LRRC41	Q15345	812 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ADCK5	Q3MIX3	580 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	MAP3K14	Q99558	947 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	LCT	P09848	1927 aa		28.37	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	CCDC69	A6NI79	296 aa		28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	KBTBD13	C9JR72	458 aa		28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	PGK1	P00558	417 aa		28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	CCDC144B	Q3MJ40	725 aa		28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	RIOX1	Q9H6W3	641 aa		28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ADD3	Q9UEY8	706 aa	Known RBP	28.36	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ZBTB5	O15062	677 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	CYTH3	O43739	400 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ALDH5A1	P51649	535 aa	Predicted RBP	28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	DHX32	Q7L7V1	743 aa	Known RBP	28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	HOMER1	Q86YM7	354 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	RGS22	Q8NE09	1264 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	AMN	Q9BXJ7	453 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	NR2E3	Q9Y5X4	410 aa		28.35	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ADCY6	O43306	1168 aa		28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	PPP1R11	O60927	126 aa	Predicted RBP	28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	CTCFL	Q8NI51	663 aa	Predicted RBP	28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	MORC4	Q8TE76	937 aa		28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	TBC1D5	Q92609	795 aa		28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	TCEANC2	Q96MN5	208 aa		28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	PIGS	Q96S52	555 aa		28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	MRPL11	Q9Y3B7	192 aa	Known RBP	28.34	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ALPK3	Q96L96	1907 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	ADAMTS4	O75173	837 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	EXOSC10	Q01780	885 aa	Known RBP	28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	EEPD1	Q7L9B9	569 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	C7orf61	Q8IZ16	206 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	USP26	Q9BXU7	913 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	SNX14	Q9Y5W7	946 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	SYNRG	Q9UMZ2	1314 aa		28.33	■■■□□ 2.13
PPP1R16A-204	ENST00000526564	DUSP11	O75319	330 aa	Known RBP	28.32	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms