RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 GTF2A1P52655 376 aaPredicted RBP8.92□□□□□ -0.98
BDNF-213ENST00000525950 PMS1P54277 932 aaKnown RBP8.92□□□□□ -0.98
BDNF-213ENST00000525950 DTHD1Q6ZMT9 781 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 POTEDQ86YR6 584 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 BLIDQ8IZY5 108 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 MIGA1Q8NAN2 632 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 CAGE1Q8TC20 777 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
BDNF-213ENST00000525950 TRIM47Q96LD4 638 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 CAPS2Q9BXY5 557 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 EDEM3Q9BZQ6 932 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 KAT14Q9H8E8 782 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 PCDHA4Q9UN74 947 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 ITGB4P16144 1822 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 KIF5BP33176 963 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 MCM7P33993 719 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 TBC1D8BQ0IIM8 1120 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 ANKS1AQ92625 1134 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 P2RX5Q93086 422 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 GEMIN8Q9NWZ8 242 aaKnown RBP8.92□□□□□ -0.98
BDNF-213ENST00000525950 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 SLIT2O94813 1529 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 TRIM49BA6NDI0 452 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 EXOC5O00471 708 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 TRIM21P19474 475 aaKnown RBP8.92□□□□□ -0.98
BDNF-213ENST00000525950 SPA17Q15506 151 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 C7orf25Q9BPX7 421 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 SH2D4AQ9H788 454 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 AGPAT5Q9NUQ2 364 aa8.92□□□□□ -0.98
BDNF-213ENST00000525950 BCL9O00512 1426 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 GRIN2DO15399 1336 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 COBLO75128 1261 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 IGHMBP2P38935 993 aaKnown RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 SBK1Q52WX2 424 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 PARP10Q53GL7 1025 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 ADGRA1Q86SQ6 560 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 SPATA4Q8NEY3 305 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 HYOU1Q9Y4L1 999 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 B4DLN1 442 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 PDE4CQ08493 712 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 MIIPQ5JXC2 388 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 CD302Q8IX05 232 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 RNF10Q8N5U6 811 aaKnown RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 CSGALNACT2Q8N6G5 542 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 CAPZA3Q96KX2 299 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 CCDC42Q96M95 316 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 CICQ96RK0 1608 aaPredicted RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 SHTN1A0MZ66 631 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 ORC2Q13416 577 aaPredicted RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 MREGQ8N565 214 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 RIN2Q8WYP3 895 aaPredicted RBP8.91□□□□□ -0.98
BDNF-213ENST00000525950 DEF6Q9H4E7 631 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 JADE2Q9NQC1 790 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 GGA2Q9UJY4 613 aa8.91□□□□□ -0.98
BDNF-213ENST00000525950 LAMB1P07942 1786 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 GNAQP50148 359 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 FKBP15Q5T1M5 1219 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 EIF1ADQ8N9N8 165 aaKnown RBP8.9□□□□□ -0.98
BDNF-213ENST00000525950 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.9□□□□□ -0.98
BDNF-213ENST00000525950 CNOT6LQ96LI5 555 aaKnown RBP8.9□□□□□ -0.98
BDNF-213ENST00000525950 ALS2CR12Q96Q35 445 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 STIM2Q9P246 746 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 ZBTB1Q9Y2K1 713 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 PCDHA13Q9Y5I0 950 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 FAM169AQ9Y6X4 670 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 hCG_1642624A0A1W2PR95 340 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 ZNF263O14978 683 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 ZNF185O15231 689 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 USP8P40818 1118 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 UBA7P41226 1012 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 C2orf54Q08AI8 447 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 CCDC178Q5BJE1 867 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 YTHDF3Q7Z739 585 aaKnown RBP8.9□□□□□ -0.98
BDNF-213ENST00000525950 SLC4A9Q96Q91 983 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 OSBPL9Q96SU4 736 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 A0A1B0GUL6 1792 aa8.9□□□□□ -0.98
BDNF-213ENST00000525950 STRCP1A6NGW2 1772 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 ERLIN2O94905 339 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 AMPD3Q01432 767 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 MAPK8IP2Q13387 824 aaPredicted RBP8.9□□□□□ -0.99
BDNF-213ENST00000525950 MCTP2Q6DN12 878 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.99
BDNF-213ENST00000525950 CCDC84Q86UT8 332 aaPredicted RBP8.9□□□□□ -0.99
BDNF-213ENST00000525950 ABCA3Q99758 1704 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 NOC4LQ9BVI4 516 aaKnown RBP8.9□□□□□ -0.99
BDNF-213ENST00000525950 ATP8A2Q9NTI2 1148 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 MAPK8IP1Q9UQF2 711 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 SIK3Q9Y2K2 1263 aa8.9□□□□□ -0.99
BDNF-213ENST00000525950 SSU72P8A0A1W2PR75 194 aa8.89□□□□□ -0.99
BDNF-213ENST00000525950 HSF2BPO75031 334 aa8.89□□□□□ -0.99
BDNF-213ENST00000525950 FGFR1OPO95684 399 aaKnown RBP8.89□□□□□ -0.99
BDNF-213ENST00000525950 CHRNDQ07001 517 aa8.89□□□□□ -0.99
BDNF-213ENST00000525950 SUSD4Q5VX71 490 aa8.89□□□□□ -0.99
BDNF-213ENST00000525950 CENPPQ6IPU0 288 aa8.89□□□□□ -0.99
BDNF-213ENST00000525950 DGKHQ86XP1 1220 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms