RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
SYVN1-205ENST00000525874 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
SYVN1-205ENST00000525874 SMPD1P17405 629 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
SYVN1-205ENST00000525874 TKFCQ3LXA3 575 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 TSHZ3Q63HK5 1081 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
SYVN1-205ENST00000525874 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
SYVN1-205ENST00000525874 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 ALAS1P13196 640 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 COL9A1P20849 921 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 IGFBP4P22692 258 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 PTGS1P23219 599 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 SLC1A4P43007 532 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 TFAP4Q01664 338 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 PDE4BQ07343 736 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-205ENST00000525874 CCDC85BQ15834 202 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-205ENST00000525874 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 NOC4LQ9BVI4 516 aaKnown RBP13.15□□□□□ -0.3
SYVN1-205ENST00000525874 SEZ6LQ9BYH1 1024 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
SYVN1-205ENST00000525874 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
SYVN1-205ENST00000525874 LCTP09848 1927 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 ZEB2O60315 1214 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 B4GALT4O60513 344 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 PLA2G6O60733 806 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 MCCP23508 829 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 CCL23P55773 120 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 PPARAQ07869 468 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 FBXO16Q8IX29 292 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
SYVN1-205ENST00000525874 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 CHD7Q9P2D1 2997 aa13.14□□□□□ -0.31
SYVN1-205ENST00000525874 SNAP25P60880 206 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 PSMC6P62333 389 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 TMEM63BQ5T3F8 832 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 NAPBQ9H115 298 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 Q9Y3F1 56 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 SLC4A7Q9Y6M7 1214 aa13.13□□□□□ -0.31
SYVN1-205ENST00000525874 RABGGTBP53611 331 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
SYVN1-205ENST00000525874 VWCEQ96DN2 955 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
SYVN1-205ENST00000525874 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
SYVN1-205ENST00000525874 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
SYVN1-205ENST00000525874 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
SYVN1-205ENST00000525874 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
SYVN1-205ENST00000525874 MYOGP15173 224 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 ZMYM1Q5SVZ6 1142 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 SCLYQ96I15 445 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYVN1-205ENST00000525874 PCDHA11Q9Y5I1 949 aa13.11□□□□□ -0.31
SYVN1-205ENST00000525874 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 NMT2O60551 498 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms