RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 CBFA2T2O43439 604 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 POU5F1Q01860 360 aaKnown RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 OCRLQ01968 901 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 GALEQ14376 348 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 PDE3AQ14432 1141 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 INAVAQ3KP66 663 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 PLA2G4EQ3MJ16 856 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 DCAF15Q66K64 600 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 RIPOR1Q6ZS17 1223 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 CYFIP1Q7L576 1253 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 C12orf40Q86WS4 652 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 CLASRPQ8N2M8 674 aaKnown RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 SMC1BQ8NDV3 1235 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 ADCY4Q8NFM4 1077 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 POF1BQ8WVV4 589 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 TRIM63Q969Q1 353 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 UBE2OQ9C0C9 1292 aaKnown RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 CABP5Q9NP86 173 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 EMC7Q9NPA0 242 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 THG1LQ9NWX6 298 aaKnown RBP6.65□□□□□ -1.34
USP47-204ENST00000525078 ZNF652Q9Y2D9 606 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 DGKBQ9Y6T7 804 aa6.65□□□□□ -1.34
USP47-204ENST00000525078 H3BRJ5 948 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 AQP7O14520 342 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 RGS13O14921 159 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 AP1G1O43747 822 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 RNASEH2AO75792 299 aaKnown RBP6.64□□□□□ -1.35
USP47-204ENST00000525078 CYP11A1P05108 521 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 SRGNP10124 158 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 CD33P20138 364 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 IREB2P48200 963 aaKnown RBP6.64□□□□□ -1.35
USP47-204ENST00000525078 LSSP48449 732 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 GUCY1A3Q02108 690 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 DSG1Q02413 1049 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 RASSF7Q02833 373 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 TRIM14Q14142 442 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 ODF1Q14990 250 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 CLUL1Q15846 466 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 USP53Q70EK8 1073 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 TRIM59Q8IWR1 403 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 CMTR2Q8IYT2 770 aaKnown RBP6.64□□□□□ -1.35
USP47-204ENST00000525078 CCT6BQ92526 530 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 SKA1Q96BD8 255 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 ORAI3Q9BRQ5 295 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 MKRN2Q9H000 416 aaKnown RBP6.64□□□□□ -1.35
USP47-204ENST00000525078 ADAM19Q9H013 955 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 CCDC86Q9H6F5 360 aaKnown RBP6.64□□□□□ -1.35
USP47-204ENST00000525078 KRT82Q9NSB4 513 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 C14orf119Q9NWQ9 140 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 WHRNQ9P202 907 aa6.64□□□□□ -1.35
USP47-204ENST00000525078 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 FZD9O00144 591 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 CBX4O00257 560 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 SOX1O00570 391 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 CAPN5O15484 640 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 GLRX3O76003 335 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 KCNH1O95259 989 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 CAPNS1P04632 268 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 SNRPB2P08579 225 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 RBP3P10745 1247 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 CPB1P15086 417 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 NAT1P18440 290 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 COPB2P35606 906 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 CCT5P48643 541 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 KPNA1P52294 538 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 ACAP2Q15057 778 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 POU4F3Q15319 338 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 SF1Q15637 639 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 PDCD2Q16342 344 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 JAKMIP3Q5VZ66 844 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 MTDHQ86UE4 582 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 FAM35AQ86V20 835 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 SLFN12Q8IYM2 578 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 ZNF513Q8N8E2 541 aaPredicted RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 BRF1Q92994 677 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 CCDC74BQ96LY2 380 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 NAA15Q9BXJ9 866 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 SPTLC3Q9NUV7 552 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 DNAJB12Q9NXW2 375 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
USP47-204ENST00000525078 INVSQ9Y283 1065 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 EMC9Q9Y3B6 208 aa6.63□□□□□ -1.35
USP47-204ENST00000525078 KLHL33A6NCF5 533 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
USP47-204ENST00000525078 OFD1O75665 1012 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 UBOX5O94941 541 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 ZKSCAN1P17029 563 aaPredicted RBP6.62□□□□□ -1.35
USP47-204ENST00000525078 RHCEP18577 417 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 MCCP23508 829 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 CDC25BP30305 580 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 GMPRP36959 345 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 ARL4DP49703 201 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 SESN3P58005 492 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 RHDQ02161 417 aa6.62□□□□□ -1.35
USP47-204ENST00000525078 MAP4K2Q12851 820 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms