RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 KAT14Q9H8E8 782 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
CTR9-202ENST00000524523 BRMS1Q9HCU9 246 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 SYNPO2Q9UMS6 1093 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TAF1P21675 1872 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
CTR9-202ENST00000524523 PLIN4Q96Q06 1357 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 FLT1P17948 1338 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 USP17L3A6NCW0 530 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 USP17L4A6NCW7 530 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 hCG_1984214I3L0E3 225 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 TSPY3P0CV98 308 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 TSPY8P0CW00 308 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 RASA1P20936 1047 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 ME1P48163 572 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 CDK8P49336 464 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 TGFB2P61812 414 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 GNL2Q13823 731 aaKnown RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 STK38Q15208 465 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 SF3A1Q15459 793 aaKnown RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 EZH2Q15910 746 aaKnown RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 FOXP4Q8IVH2 680 aaPredicted RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 ZNF713Q8N859 430 aaPredicted RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 ENGASEQ8NFI3 743 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 ZNF622Q969S3 477 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTR9-202ENST00000524523 PDLIM2Q96JY6 352 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 ARID3AQ99856 593 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 PHF20Q9BVI0 1012 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 DACT1Q9NYF0 836 aa8.65□□□□□ -1.02
CTR9-202ENST00000524523 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
CTR9-202ENST00000524523 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.03
CTR9-202ENST00000524523 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 CUTAO60888 179 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 TOP1P11387 765 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 SNW1Q13573 536 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 GRM4Q14833 912 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 PKN1Q16512 942 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 PFKFB3Q16875 520 aaPredicted RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
CTR9-202ENST00000524523 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 CYP2U1Q7Z449 544 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 METTL16Q86W50 562 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 BICD2Q8TD16 824 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 CCDC12Q8WUD4 166 aaPredicted RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 MRPS27Q92552 414 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 PHKBQ93100 1093 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 CHAMP1Q96JM3 812 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 SPZ1Q9BXG8 430 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 IL17RBQ9NRM6 502 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 PCDHA7Q9UN72 937 aa8.64□□□□□ -1.03
CTR9-202ENST00000524523 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
CTR9-202ENST00000524523 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 MYH13Q9UKX3 1938 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 KINO60870 393 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 ENTPD3O75355 529 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 WFS1O76024 890 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 SCG2P13521 617 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 LIG1P18858 919 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 PLCD1P51178 756 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 ORC2Q13416 577 aaPredicted RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 PTPAQ15257 358 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 GRIK5Q16478 980 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 CCDC93Q567U6 631 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 DACT2Q5SW24 774 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 AXDND1Q5T1B0 1012 aaPredicted RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 FKBP1CQ5VVH2 108 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 APOBEC3HQ6NTF7 200 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 SASS6Q6UVJ0 657 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 CCAR1Q8IX12 1150 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 NPAS3Q8IXF0 933 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 DIS3L2Q8IYB7 885 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 FMR1NBQ8N0W7 255 aaPredicted RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 PHTF2Q8N3S3 785 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 DAGLBQ8NCG7 672 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 CCDC34Q96HJ3 373 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 PYM1Q9BRP8 204 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 RBSNQ9H1K0 784 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 SERPINB13Q9UIV8 391 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 HOOK1Q9UJC3 728 aaKnown RBP8.63□□□□□ -1.03
CTR9-202ENST00000524523 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
CTR9-202ENST00000524523 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms