RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 TINF2Q9BSI4 451 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
TTC39A-213ENST00000524442 CPVLQ9H3G5 476 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 VAT1LQ9HCJ6 419 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 ABCB11O95342 1321 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 SYNGAP1Q96PV0 1343 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 MSCO60682 206 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 SGPL1O95470 568 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
TTC39A-213ENST00000524442 CYP2C19P33261 490 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 TRIM32Q13049 653 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
TTC39A-213ENST00000524442 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 SAMD3Q8N6K7 520 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
TTC39A-213ENST00000524442 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
TTC39A-213ENST00000524442 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 MRPL11Q9Y3B7 192 aaKnown RBP11.75□□□□□ -0.53
TTC39A-213ENST00000524442 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
TTC39A-213ENST00000524442 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 ASB14A6NK59 587 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 ZBTB43O43298 467 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 CYBAP13498 195 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 USH1GQ495M9 461 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 Q6ZUG5 572 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
TTC39A-213ENST00000524442 IL17RAQ96F46 866 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 TCEANC2Q96MN5 208 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 DEFB118Q96PH6 123 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
TTC39A-213ENST00000524442 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
TTC39A-213ENST00000524442 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
TTC39A-213ENST00000524442 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
TTC39A-213ENST00000524442 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 NFIBO00712 420 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 CYTH3O43739 400 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-213ENST00000524442 EVCP57679 992 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 BAATQ14032 418 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-213ENST00000524442 KIAA0100Q14667 2235 aaKnown RBP11.73□□□□□ -0.53
TTC39A-213ENST00000524442 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 DNERQ8NFT8 737 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 BRF1Q92994 677 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 PIGSQ96S52 555 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
TTC39A-213ENST00000524442 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
TTC39A-213ENST00000524442 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 PCDHA1Q9Y5I3 950 aa11.73□□□□□ -0.53
TTC39A-213ENST00000524442 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 B4DLN1 442 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 SEPT4O43236 478 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 CPA1P15085 419 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 CNGA1P29973 690 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 RPS6P62753 249 aaKnown RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 GHRHRQ02643 423 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 RTN1Q16799 776 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 C8orf34Q49A92 452 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 SRBD1Q8N5C6 995 aaKnown RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 FGD4Q96M96 766 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 DDX20Q9UHI6 824 aaKnown RBP11.72□□□□□ -0.53
TTC39A-213ENST00000524442 OGDHLQ9ULD0 1010 aa11.72□□□□□ -0.53
TTC39A-213ENST00000524442 NID2Q14112 1375 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 CENPFP49454 3210 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 TAL1P17542 331 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 RXRAP19793 462 aa11.71□□□□□ -0.53
TTC39A-213ENST00000524442 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
TTC39A-213ENST00000524442 MLLT1Q03111 559 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms