RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 MSL3Q8N5Y2 521 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 TATDN2Q93075 761 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 LBHD1Q9BQE6 289 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 TINF2Q9BSI4 451 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 UBE2OQ9C0C9 1292 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 LAMA3Q16787 3333 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
CTNNA1-242ENST00000524292 SMAPO00193 183 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 BMP3P12645 472 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 SLC1A4P43007 532 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 ZNF792Q3KQV3 632 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 PRAMEF19Q5SWL8 479 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 SLFN13Q68D06 897 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 RNF180Q86T96 592 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 GMCL1Q96IK5 515 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 LNPKQ9C0E8 428 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 SLC38A10Q9HBR0 1119 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 STX8Q9UNK0 236 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 SZT2Q5T011 3432 aa10.06□□□□□ -0.8
CTNNA1-242ENST00000524292 TMEM232C9JQI7 657 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 AKR1A1P14550 325 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 RTP1P59025 263 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 CTDSPL2Q05D32 466 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 HIC1Q14526 733 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 LRRC41Q15345 812 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 ALX1Q15699 326 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 GPIHBP1Q8IV16 184 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 ANKRD35Q8N283 1001 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 CHST13Q8NET6 341 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 RAVER2Q9HCJ3 691 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 TOMM22Q9NS69 142 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 ANAPC4Q9UJX5 808 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 ATP11BQ9Y2G3 1177 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 SYNGAP1Q96PV0 1343 aa10.05□□□□□ -0.8
CTNNA1-242ENST00000524292 GPR37O15354 613 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 FOXP2O15409 715 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 ORC4O43929 436 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 MCCP23508 829 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 ADCYAP1R1P41586 468 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 SLC39A5Q6ZMH5 540 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 STAG1Q8WVM7 1258 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 ACAD9Q9H845 621 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 ZMYM6O95789 1325 aa10.04□□□□□ -0.8
CTNNA1-242ENST00000524292 ZNFX1Q9P2E3 1918 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 DNAJC25-GNG10A0A024R161 153 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 SOX1O00570 391 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 PLA2G6O60733 806 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 TAL1P17542 331 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 CCDC96Q2M329 555 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 TKFCQ3LXA3 575 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 LRIT3Q3SXY7 679 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 B4GALNT3Q6L9W6 998 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 MAMDC4Q6UXC1 1216 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 CHD1LQ86WJ1 897 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 SMC5Q8IY18 1101 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 ZHX1Q9UKY1 873 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
CTNNA1-242ENST00000524292 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 NMT2O60551 498 aa10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 PGK1P00558 417 aa10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 FGAP02671 866 aa10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 HSPD1P10809 573 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-242ENST00000524292 SNX17Q15036 470 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms