RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 CLUHP3Q96NS8 147 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 CDC6Q99741 560 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 DHRS4Q9BTZ2 278 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 ASPNQ9BXN1 380 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 LRP2BPQ9P2M1 347 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 CGGBP1Q9UFW8 167 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-214ENST00000524177 CTNND2Q9UQB3 1225 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 C6orf222P0C671 652 aaPredicted RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 PABPC1P11940 636 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 ITGA4P13612 1032 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 ETV3P41162 512 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 PLEKHG6Q3KR16 790 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 FNDC3BQ53EP0 1204 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 ADAT2Q7Z6V5 191 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 BTN2A2Q8WVV5 523 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 RCC1LQ96I51 464 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 CWC22Q9HCG8 908 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 PRDM10Q9NQV6 1147 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 DDX56Q9NY93 547 aaKnown RBP4.88□□□□□ -1.63
CSMD1-214ENST00000524177 SUGT1Q9Y2Z0 365 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 EMC9Q9Y3B6 208 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 CNTNAP4Q9C0A0 1308 aa4.88□□□□□ -1.63
CSMD1-214ENST00000524177 FAM83GA6ND36 823 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 GSG1L2A8MUP6 293 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 PRODHO43272 600 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 PPM1BO75688 479 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 EOMESO95936 686 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 C1QTNF9P0C862 333 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 MYCLP1P12525 358 aaPredicted RBP4.87□□□□□ -1.63
CSMD1-214ENST00000524177 SDSP20132 328 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 BUD31P41223 144 aaPredicted RBP4.87□□□□□ -1.63
CSMD1-214ENST00000524177 CDKN1CP49918 316 aaPredicted RBP4.87□□□□□ -1.63
CSMD1-214ENST00000524177 ZNF445P59923 1031 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 SUMO1P63165 101 aaKnown RBP4.87□□□□□ -1.63
CSMD1-214ENST00000524177 NBPF9Q3BBW0 867 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 TRIM61Q5EBN2 209 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 MPZL3Q6UWV2 235 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 RNF180Q86T96 592 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 SIAH1Q8IUQ4 282 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 SCUBE1Q8IWY4 988 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 ARHGEF39Q8N4T4 335 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 IER2Q9BTL4 223 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 PCDHB12Q9Y5F1 795 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 FHOD1Q9Y613 1164 aa4.87□□□□□ -1.63
CSMD1-214ENST00000524177 DLX3O60479 287 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 PDE8AO60658 829 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 LRRN2O75325 713 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 KCNH1O95259 989 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 KRT1P04264 644 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 GLI1P08151 1106 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 AFMP43652 599 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 CYP4F3Q08477 520 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 SF1Q15637 639 aaKnown RBP4.86□□□□□ -1.63
CSMD1-214ENST00000524177 NSMFQ6X4W1 530 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 FAM214BQ7L5A3 538 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 JAMLQ86YT9 394 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 SPACA3Q8IXA5 215 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 SLC7A14Q8TBB6 771 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 SYTL5Q8TDW5 730 aaPredicted RBP4.86□□□□□ -1.63
CSMD1-214ENST00000524177 CHAC2Q8WUX2 184 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 BRF1Q92994 677 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 C1orf159Q96HA4 380 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 Q96M66 194 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 TARS2Q9BW92 718 aaKnown RBP4.86□□□□□ -1.63
CSMD1-214ENST00000524177 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 IRF2BPLQ9H1B7 796 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 NOL6Q9H6R4 1146 aaKnown RBP4.86□□□□□ -1.63
CSMD1-214ENST00000524177 TRIM39Q9HCM9 518 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 AKT3Q9Y243 479 aa4.86□□□□□ -1.63
CSMD1-214ENST00000524177 DNAJC25-GNG10A0A024R161 153 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 A0A087WZG4 1122 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 NOP56O00567 594 aaKnown RBP4.85□□□□□ -1.63
CSMD1-214ENST00000524177 DNAJC8O75937 253 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GFRA1P56159 465 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GRB10Q13322 594 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 NTRK3Q16288 839 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 NKPD1Q17RQ9 610 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GTF2IRD2BQ6EKJ0 949 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 POMZP3Q6PJE2 187 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 TTLL10Q6ZVT0 673 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 BRAPQ7Z569 592 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 TMC3Q7Z5M5 1100 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GTF2IRD2Q86UP8 949 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 CRACR2BQ8N4Y2 399 aaPredicted RBP4.85□□□□□ -1.63
CSMD1-214ENST00000524177 FIBCD1Q8N539 461 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GSTCDQ8NEC7 633 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 KIRREL1Q96J84 757 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 IPO9Q96P70 1041 aaKnown RBP4.85□□□□□ -1.63
CSMD1-214ENST00000524177 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 NKX2-4Q9H2Z4 354 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 CAAP1Q9H8G2 361 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 SLC52A2Q9HAB3 445 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 TYW1Q9NV66 732 aaKnown RBP4.85□□□□□ -1.63
CSMD1-214ENST00000524177 GFOD1Q9NXC2 390 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 PRR13Q9NZ81 148 aa4.85□□□□□ -1.63
CSMD1-214ENST00000524177 FBXL21Q9UKT6 434 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms