RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 TANC1Q9C0D5 1861 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-220ENST00000523765 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 LCTP09848 1927 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-220ENST00000523765 LCHNA4D1U4 455 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 CYP2C9P11712 490 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 GDPD5Q8WTR4 605 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-220ENST00000523765 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
LAMA4-220ENST00000523765 STK25O00506 426 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 NKX3-2P78367 333 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 GJD3Q8N144 294 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 ARHGEF10LQ9HCE6 1279 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
LAMA4-220ENST00000523765 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
LAMA4-220ENST00000523765 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 PRKAB2O43741 272 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 RAD21O60216 631 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 GNAI3P08754 354 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
LAMA4-220ENST00000523765 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
LAMA4-220ENST00000523765 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
LAMA4-220ENST00000523765 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 DMDP11532 3685 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 SIP14410 1827 aa11.7□□□□□ -0.54
LAMA4-220ENST00000523765 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 TNFAIP2Q03169 654 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 RPUSD2Q8IZ73 545 aaKnown RBP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 CPXCR1Q8N123 301 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 UBE2ZQ9H832 354 aaPredicted RBP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 SPC25Q9HBM1 224 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
LAMA4-220ENST00000523765 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 HDAC5Q9UQL6 1122 aa11.69□□□□□ -0.54
LAMA4-220ENST00000523765 CHGBP05060 677 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 SMPD1P17405 629 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-220ENST00000523765 CDK8P49336 464 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 FSCN1Q16658 493 aaKnown RBP11.68□□□□□ -0.54
LAMA4-220ENST00000523765 TLK2Q86UE8 772 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-220ENST00000523765 MTUS1Q9ULD2 1270 aa11.68□□□□□ -0.54
LAMA4-220ENST00000523765 ATG2AQ2TAZ0 1938 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 MYH4Q9Y623 1939 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-220ENST00000523765 BCAR3O75815 825 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 GNAI2P04899 355 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 PDE6AP16499 860 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 KCNA5P22460 613 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 TCTN1Q2MV58 587 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 HFE2Q6ZVN8 426 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
LAMA4-220ENST00000523765 CERS3Q8IU89 383 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 SLF1Q9BQI6 1058 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
LAMA4-220ENST00000523765 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
LAMA4-220ENST00000523765 ZNF532Q9HCE3 1301 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 POTEMA6NI47 508 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 COPB2P35606 906 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-220ENST00000523765 LEXMQ3ZCV2 418 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 PTCRAQ6ISU1 281 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-220ENST00000523765 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 SLC9A7Q96T83 725 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 SWAP70Q9UH65 585 aa11.66□□□□□ -0.54
LAMA4-220ENST00000523765 TNKSO95271 1327 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 TRIP12Q14669 1992 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms