RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HOOK3Q86VS8 718 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 JAKMIP2Q96AA8 810 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 PNPLA7Q6ZV29 1317 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 STRN3Q13033 797 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 GLG1Q92896 1179 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 CARD6Q9BX69 1037 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 TNFAIP3P21580 790 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 TERF1P54274 439 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 LARP4BQ92615 738 aaKnown RBP14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 EXOC7Q9UPT5 735 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 KDM4FA0A1W2PPD8 638 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 RNASE9P60153 205 aaKnown RBP14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 CDC37Q16543 378 aaPredicted RBP14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 TBC1D16Q8TBP0 767 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 DCPSQ96C86 337 aaKnown RBP14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
PCDHGB1-201ENST00000523390 GBP2P32456 591 aaPredicted RBP14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 VWA3BQ502W6 1294 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 PSMB7Q99436 277 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 U2AF2P26368 475 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 PRPHP41219 470 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 STAT2P52630 851 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 KLHL30Q0D2K2 578 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 SEPT2Q15019 361 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 GNPTABQ3T906 1256 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 WDR44Q5JSH3 913 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 SYDE2Q5VT97 1194 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 LRCH2Q5VUJ6 765 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 TYW1BQ6NUM6 668 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 FAM178BQ8IXR5 827 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 NAPGQ99747 312 aaPredicted RBP14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 SGMS1Q86VZ5 419 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 MCF2L2Q86YR7 1114 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 OR8K1Q8NGG5 319 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 TEKT3Q9BXF9 490 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 MAN1B1Q9UKM7 699 aa14.5□□□□□ -0.09
PCDHGB1-201ENST00000523390 LAD1O00515 517 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 PPP2R3AQ06190 1150 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 HOXA13P31271 388 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 DDIT3P35638 169 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 LRRC41Q15345 812 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 ARHGAP44Q17R89 818 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 GJA10Q969M2 543 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 TRERF1Q96PN7 1200 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 TMEM179Q6ZVK1 233 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 ARMCX3Q9UH62 379 aaPredicted RBP14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 GOLGA8FQ08AF8 430 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 GOLGA8DPQ0D2H9 430 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 FAM102BQ5T8I3 360 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
PCDHGB1-201ENST00000523390 DNM2P50570 870 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 NCAPG2Q86XI2 1143 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 LRRC8AQ8IWT6 810 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 AK8Q96MA6 479 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 STK36Q9NRP7 1315 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 MEIS1O00470 390 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 XRCC5P13010 732 aaKnown RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 PTPREP23469 700 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ACTN2P35609 894 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 PFKFB3Q16875 520 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 RABGAP1Q9Y3P9 1069 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 MYOM1P52179 1685 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 PLCB3Q01970 1234 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 CCDC50Q8IVM0 306 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 TSGA10Q9BZW7 698 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 EPB41L4AQ9HCS5 686 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 LARSQ9P2J5 1176 aaKnown RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ATP6V0A2Q9Y487 856 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 COL4A3BPQ9Y5P4 624 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 PLCG1P19174 1290 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 CASP1P29466 404 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 KRT222Q8N1A0 295 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 IFT81Q8WYA0 676 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ERO1AQ96HE7 468 aa14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
PCDHGB1-201ENST00000523390 ERCC5P28715 1186 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 COPB1P53618 953 aaKnown RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 TBC1D10BQ4KMP7 808 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 C12orf60Q5U649 245 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 SFMBT2Q5VUG0 894 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 MTA3Q9BTC8 594 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 MLXIPQ9HAP2 919 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 SECISBP2LQ93073 1101 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms