RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	HSP90AA4P	Q58FG1	418 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	PPP1R18	Q6NYC8	613 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	GSDMA	Q96QA5	445 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	RIC8A	Q9NPQ8	531 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	DISC1	Q9NRI5	854 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	ARFGEF1	Q9Y6D6	1849 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	CNTNAP1	P78357	1384 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	EDIL3	O43854	480 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	CD44	P16070	742 aa	Known RBP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	STAT6	P42226	847 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	CUL4B	Q13620	913 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	RBM26	Q5T8P6	1007 aa	Known RBP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	CIAPIN1	Q6FI81	312 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	POTED	Q86YR6	584 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	LRRC8A	Q8IWT6	810 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	JDP2	Q8WYK2	163 aa		18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	NUP88	Q99567	741 aa	Predicted RBP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
FAM49B-223	ENST00000522746		F5H6K3	240 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	KLRC3	Q07444	240 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	QRICH1	Q2TAL8	776 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	NAALADL2	Q58DX5	795 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	PLIN2	Q99541	437 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	VPS33B	Q9H267	617 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	SPTLC3	Q9NUV7	552 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	NFE2L3	Q9Y4A8	694 aa		18.84	■□□□□ 0.61
FAM49B-223	ENST00000522746	GTPBP6	O43824	516 aa	Predicted RBP	18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	SERPINC1	P01008	464 aa		18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	UBA7	P41226	1012 aa		18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	TMC6	Q7Z403	805 aa		18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	ENOX1	Q8TC92	643 aa	Known RBP	18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	TMEM39B	Q9GZU3	492 aa		18.83	■□□□□ 0.61
FAM49B-223	ENST00000522746	TDP2	O95551	362 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	TNNI2	P48788	182 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	CLK2	P49760	499 aa	Known RBP	18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	UBASH3A	P57075	661 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	SPDYE2	Q495Y8	402 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	AGBL3	Q8NEM8	1001 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	RASSF8	Q8NHQ8	419 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	FAM151A	Q8WW52	585 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746	CCSER1	Q9C0I3	900 aa		18.83	■□□□□ 0.6
FAM49B-223	ENST00000522746		A0A1W2PRG0	241 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	NDUFB10	O96000	172 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	CDC37	Q16543	378 aa	Predicted RBP	18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	RRAGB	Q5VZM2	374 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	KLHL10	Q6JEL2	608 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	GMCL1P1	Q8NEA9	526 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	LRRC15	Q8TF66	581 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	CUL5	Q93034	780 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	HERC5	Q9UII4	1024 aa	Known RBP	18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	SLC37A4	O43826	429 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	ERCC5	P28715	1186 aa	Predicted RBP	18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	TEC	P42680	631 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	SNAP25	P60880	206 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	PSTPIP2	Q9H939	334 aa		18.82	■□□□□ 0.6
FAM49B-223	ENST00000522746	ASTN2	O75129	1339 aa	Predicted RBP	18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	PPP1R3G	B7ZBB8	358 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	WNT10B	O00744	389 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	ZNF18	P17022	549 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	ORC2	Q13416	577 aa	Predicted RBP	18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	SAMSN1	Q9NSI8	373 aa	Known RBP	18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	IMPACT	Q9P2X3	320 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	MYO1B	O43795	1136 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	MRPL12	P52815	198 aa	Known RBP	18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	STX17	P56962	302 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	MIGA2	Q7L4E1	593 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	CABP7	Q86V35	215 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	GMCL1	Q96IK5	515 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	AK8	Q96MA6	479 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	MTMR9	Q96QG7	549 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	MYOZ2	Q9NPC6	264 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	PCDHA1	Q9Y5I3	950 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	GJA3	Q9Y6H8	435 aa		18.81	■□□□□ 0.6
FAM49B-223	ENST00000522746	TXK	P42681	527 aa		18.8	■□□□□ 0.6
FAM49B-223	ENST00000522746	CALCRL	Q16602	461 aa		18.8	■□□□□ 0.6
FAM49B-223	ENST00000522746	PTPN21	Q16825	1174 aa		18.8	■□□□□ 0.6
FAM49B-223	ENST00000522746	ZBED3	Q96IU2	234 aa	Predicted RBP	18.8	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L15	C9J2P7	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L13	C9JLJ4	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	TMEM232	C9JQI7	657 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L11	C9JVI0	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L18	D6R9N7	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L22	D6RA61	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L17	D6RBQ6	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L19	D6RCP7	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L20	D6RJB6	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	CBFA2T2	O43439	604 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	RPN1	P04843	607 aa	Known RBP	18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	PLCG1	P19174	1290 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	ECE1	P42892	770 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L24	Q0WX57	530 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	USP17L6P	Q6QN14	398 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	SPICE1	Q8N0Z3	855 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	INTS13	Q9NVM9	706 aa		18.79	■□□□□ 0.6
FAM49B-223	ENST00000522746	MYH7B	A7E2Y1	1941 aa		18.79	■□□□□ 0.6

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