RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
SYNPO-205ENST00000522122 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 TRIM7Q9C029 511 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 RWDD2AQ9UIY3 292 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 RICTORQ6R327 1708 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 CPDO75976 1380 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
SYNPO-205ENST00000522122 TAOK1Q7L7X3 1001 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 CCDC105Q8IYK2 499 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 GJB4Q9NTQ9 266 aa15.23■□□□□ 0.03
SYNPO-205ENST00000522122 MFAP3LO75121 409 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 ATG9AQ7Z3C6 839 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 PIH1D3Q9NQM4 214 aaKnown RBP15.22■□□□□ 0.03
SYNPO-205ENST00000522122 MRFAP1Q9Y605 127 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 C3P01024 1663 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 DKC1O60832 514 aaKnown RBP eCLIP15.22■□□□□ 0.03
SYNPO-205ENST00000522122 RAB17Q9H0T7 212 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 TCP10Q12799 353 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 RSRC1Q96IZ7 334 aaKnown RBP15.22■□□□□ 0.03
SYNPO-205ENST00000522122 TUBGCP2Q9BSJ2 902 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 GOLGA8KD6RF30 607 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 PTPREP23469 700 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
SYNPO-205ENST00000522122 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
SYNPO-205ENST00000522122 ASAP1Q9ULH1 1129 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 NEDD4P46934 1319 aa15.22■□□□□ 0.03
SYNPO-205ENST00000522122 KCNK3O14649 394 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 GUCY2FP51841 1108 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 U2AF1L4Q8WU68 220 aaKnown RBP15.21■□□□□ 0.03
SYNPO-205ENST00000522122 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 RFX5P48382 616 aaPredicted RBP15.21■□□□□ 0.03
SYNPO-205ENST00000522122 NR5A1Q13285 461 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 FAM26FQ5R3K3 315 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 MAGEF1Q9HAY2 307 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 PPFIA4O75335 1185 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 TADA3O75528 432 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 PPARDQ03181 441 aa15.21■□□□□ 0.03
SYNPO-205ENST00000522122 ZNF658Q5TYW1 1059 aaPredicted RBP15.21■□□□□ 0.03
SYNPO-205ENST00000522122 E7EVH7 732 aa15.21■□□□□ 0.02
SYNPO-205ENST00000522122 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.02
SYNPO-205ENST00000522122 MCAMP43121 646 aa15.21■□□□□ 0.02
SYNPO-205ENST00000522122 GTF2IP78347 998 aa15.21■□□□□ 0.02
SYNPO-205ENST00000522122 TPH2Q8IWU9 490 aa15.21■□□□□ 0.02
SYNPO-205ENST00000522122 BUB1O43683 1085 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 HNRNPH2P55795 449 aaKnown RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 UAP1Q16222 522 aaPredicted RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 RDH13Q8NBN7 331 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 GNGT1P63211 74 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 USP40Q9NVE5 1235 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 CTNNA1P35221 906 aaKnown RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 POLR2FP61218 127 aaKnown RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 CEP85LQ5SZL2 805 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 TUBE1Q9UJT0 475 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 IL6STP40189 918 aaPredicted RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 PPP2R5EQ16537 467 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 CCDC97Q96F63 343 aaPredicted RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 PANK4Q9NVE7 773 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 ZBTB1Q9Y2K1 713 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 RRP15Q9Y3B9 282 aaKnown RBP15.2■□□□□ 0.02
SYNPO-205ENST00000522122 FAM169AQ9Y6X4 670 aa15.2■□□□□ 0.02
SYNPO-205ENST00000522122 MYCLP12524 364 aaPredicted RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 STRN3Q13033 797 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 MCTP2Q6DN12 878 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 PPFIBP2Q8ND30 876 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 CNOT6LQ96LI5 555 aaKnown RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 PLCB1Q9NQ66 1216 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 FAM204AQ9H8W3 233 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 LAD1O00515 517 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 KRIT1O00522 736 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 H2AFZP0C0S5 128 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 ABCB4P21439 1286 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 RCAN1P53805 252 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 PDIA6Q15084 440 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 DENND2CQ68D51 928 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 H2AFVQ71UI9 128 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms