RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SHISA4Q96DD7 197 aa27.85■■■□□ 2.05
PVT1-212ENST00000521951 TRERF1Q96PN7 1200 aa27.85■■■□□ 2.05
PVT1-212ENST00000521951 HOMER2Q9NSB8 354 aa27.85■■■□□ 2.05
PVT1-212ENST00000521951 VPS54Q9P1Q0 977 aa27.85■■■□□ 2.05
PVT1-212ENST00000521951 SLC25A27O95847 323 aa27.84■■■□□ 2.05
PVT1-212ENST00000521951 CCNA1P78396 465 aa27.84■■■□□ 2.05
PVT1-212ENST00000521951 SH3GLB2Q9NR46 395 aa27.84■■■□□ 2.05
PVT1-212ENST00000521951 SAGE1Q9NXZ1 904 aa27.84■■■□□ 2.05
PVT1-212ENST00000521951 MRPL11Q9Y3B7 192 aaKnown RBP27.84■■■□□ 2.05
PVT1-212ENST00000521951 KIF3AQ9Y496 699 aa27.84■■■□□ 2.05
PVT1-212ENST00000521951 NAPAP54920 295 aa27.83■■■□□ 2.05
PVT1-212ENST00000521951 MUM1L1Q5H9M0 696 aa27.83■■■□□ 2.05
PVT1-212ENST00000521951 PORCNQ9H237 461 aa27.83■■■□□ 2.05
PVT1-212ENST00000521951 GJB4Q9NTQ9 266 aa27.83■■■□□ 2.05
PVT1-212ENST00000521951 RNF146Q9NTX7 359 aa27.83■■■□□ 2.05
PVT1-212ENST00000521951 ERCC3P19447 782 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 FOSBP53539 338 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 NCAPG2Q86XI2 1143 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 SHCBP1Q8NEM2 672 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 CLEC4DQ8WXI8 215 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 WBP1LQ9NX94 342 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 COPB2P35606 906 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 PPP1R18Q6NYC8 613 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 CHST13Q8NET6 341 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 BEGAINQ9BUH8 593 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 EFCC1Q9HA90 598 aa27.82■■■□□ 2.04
PVT1-212ENST00000521951 DAXXQ9UER7 740 aaPredicted RBP27.82■■■□□ 2.04
PVT1-212ENST00000521951 OPLAHO14841 1288 aa27.81■■■□□ 2.04
PVT1-212ENST00000521951 XBP1P17861 261 aa27.81■■■□□ 2.04
PVT1-212ENST00000521951 CCDC12Q8WUD4 166 aaPredicted RBP27.81■■■□□ 2.04
PVT1-212ENST00000521951 C8orf76Q96K31 380 aa27.81■■■□□ 2.04
PVT1-212ENST00000521951 MROH8Q9H579 483 aa27.81■■■□□ 2.04
PVT1-212ENST00000521951 CEP350Q5VT06 3117 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 SMCO2A6NFE2 343 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 NFIBO00712 420 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 CCDC148Q8NFR7 591 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 ACAD9Q9H845 621 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 KCNJ14Q9UNX9 436 aa27.8■■■□□ 2.04
PVT1-212ENST00000521951 LARP1BQ659C4 914 aaKnown RBP27.79■■■□□ 2.04
PVT1-212ENST00000521951 FAM177A1Q8N128 213 aaPredicted RBP27.79■■■□□ 2.04
PVT1-212ENST00000521951 FBXO40Q9UH90 709 aa27.79■■■□□ 2.04
PVT1-212ENST00000521951 NLRP5P59047 1200 aa27.78■■■□□ 2.04
PVT1-212ENST00000521951 KRT40Q6A162 431 aa27.78■■■□□ 2.04
PVT1-212ENST00000521951 CCAR1Q8IX12 1150 aaKnown RBP27.78■■■□□ 2.04
PVT1-212ENST00000521951 TBC1D5Q92609 795 aa27.78■■■□□ 2.04
PVT1-212ENST00000521951 PHF20Q9BVI0 1012 aa27.78■■■□□ 2.04
PVT1-212ENST00000521951 ZMYND12Q9H0C1 365 aa27.78■■■□□ 2.04
PVT1-212ENST00000521951 ESYT2A0FGR8 921 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 GUCY1B3Q02153 619 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 TRIM29Q14134 588 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 WDR78Q5VTH9 848 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 JMYQ8N9B5 988 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 FBXO18Q8NFZ0 1043 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 IPO9Q96P70 1041 aaKnown RBP27.77■■■□□ 2.04
PVT1-212ENST00000521951 PSTPIP2Q9H939 334 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 CWC22Q9HCG8 908 aaKnown RBP27.77■■■□□ 2.04
PVT1-212ENST00000521951 RIC8AQ9NPQ8 531 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 PCNTO95613 3336 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 GPR25O00155 361 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 MAPK4P31152 587 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 SP3Q02447 781 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 MCF2L2Q86YR7 1114 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 RGS22Q8NE09 1264 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 C6orf50Q9HD87 102 aa27.77■■■□□ 2.04
PVT1-212ENST00000521951 ZNFX1Q9P2E3 1918 aaKnown RBP27.76■■■□□ 2.03
PVT1-212ENST00000521951 PDCP20941 246 aa27.76■■■□□ 2.03
PVT1-212ENST00000521951 ADCY7P51828 1080 aa27.76■■■□□ 2.03
PVT1-212ENST00000521951 NSMFQ6X4W1 530 aa27.76■■■□□ 2.03
PVT1-212ENST00000521951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.76■■■□□ 2.03
PVT1-212ENST00000521951 CUL5Q93034 780 aa27.76■■■□□ 2.03
PVT1-212ENST00000521951 ADAMTS3O15072 1205 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 ECM2O94769 699 aaPredicted RBP27.75■■■□□ 2.03
PVT1-212ENST00000521951 CFBP00751 764 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 SYT1P21579 422 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 GNA11P29992 359 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 MRPL12P52815 198 aaKnown RBP27.75■■■□□ 2.03
PVT1-212ENST00000521951 NPY5RQ15761 445 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 A1CFQ9NQ94 594 aaKnown RBP27.75■■■□□ 2.03
PVT1-212ENST00000521951 TSKSQ9UJT2 592 aa27.75■■■□□ 2.03
PVT1-212ENST00000521951 RBBP6Q7Z6E9 1792 aaKnown RBP27.75■■■□□ 2.03
PVT1-212ENST00000521951 MGAMO43451 1857 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 DOCK3Q8IZD9 2030 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 MMP1P03956 469 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 CALML3P27482 149 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 LACTBP83111 547 aaPredicted RBP27.74■■■□□ 2.03
PVT1-212ENST00000521951 NOM1Q5C9Z4 860 aaKnown RBP27.74■■■□□ 2.03
PVT1-212ENST00000521951 GPR142Q7Z601 462 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 PLEKHH3Q7Z736 793 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 GLT8D2Q9H1C3 349 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 PCDHA4Q9UN74 947 aa27.74■■■□□ 2.03
PVT1-212ENST00000521951 PLXNB2O15031 1838 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 GCOM1H8Y6P7 765 aaPredicted RBP27.73■■■□□ 2.03
PVT1-212ENST00000521951 MEIS2O14770 477 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 POLR2MP0CAP2 368 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 GHRHRQ02643 423 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 GALNT17Q6IS24 598 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 USP17L6PQ6QN14 398 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 RNF207Q6ZRF8 634 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 ANKRD35Q8N283 1001 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 MMP19Q99542 508 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms