RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FAM105AQ9NUU6 356 aa5.39□□□□□ -1.55
VPS13B-208ENST00000521037 WASHC2AQ641Q2 1341 aa5.39□□□□□ -1.55
VPS13B-208ENST00000521037 UBR2Q8IWV8 1755 aa5.39□□□□□ -1.55
VPS13B-208ENST00000521037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-208ENST00000521037 EDN3P14138 238 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 NPR3P17342 541 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 EIF1AXP47813 144 aaKnown RBP5.38□□□□□ -1.55
VPS13B-208ENST00000521037 CXCL9Q07325 125 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 MAP7Q14244 749 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 C8orf34Q49A92 452 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 SOGA3Q5TF21 947 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 HDGFL2Q7Z4V5 671 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-208ENST00000521037 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-208ENST00000521037 USP48Q86UV5 1035 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 YIPF2Q9BWQ6 316 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 LRRC4CQ9HCJ2 640 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 FOXD3Q9UJU5 478 aaPredicted RBP5.38□□□□□ -1.55
VPS13B-208ENST00000521037 SLC5A6Q9Y289 635 aa5.38□□□□□ -1.55
VPS13B-208ENST00000521037 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-208ENST00000521037 ECEL1O95672 775 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 MAOBP27338 520 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 TM4SF4P48230 202 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 RBM25P49756 843 aaKnown RBP5.37□□□□□ -1.55
VPS13B-208ENST00000521037 GMPSP49915 693 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-208ENST00000521037 BNIP3Q12983 259 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 CRY2Q49AN0 593 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 CDC37L1Q7L3B6 337 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 TMC1Q8TDI8 760 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 ASAP3Q8TDY4 903 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 SHISA4Q96DD7 197 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 TRIM56Q9BRZ2 755 aaKnown RBP5.37□□□□□ -1.55
VPS13B-208ENST00000521037 TERF2IPQ9NYB0 399 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 POLIQ9UNA4 740 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 ASTN2O75129 1339 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-208ENST00000521037 NPC1L1Q9UHC9 1359 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 XIRP2A4UGR9 3374 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 REV3LO60673 3130 aa5.37□□□□□ -1.55
VPS13B-208ENST00000521037 YDJCA8MPS7 323 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 ADM5C9JUS6 153 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 NPR1P16066 1061 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 FUT4P22083 530 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 ATP2B4P23634 1241 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 MPSTP25325 297 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 SLC39A6Q13433 755 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 EIF4A2Q14240 407 aaKnown RBP5.36□□□□□ -1.55
VPS13B-208ENST00000521037 Q7L0L9 218 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 OTOP1Q7RTM1 612 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 CCNJLQ8IV13 435 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 RTKN2Q8IZC4 609 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 TCF12Q99081 682 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 ZNF408Q9H9D4 720 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 LGR6Q9HBX8 967 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 GBA2Q9HCG7 927 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-208ENST00000521037 MBNL3Q9NUK0 354 aaKnown RBP5.36□□□□□ -1.55
VPS13B-208ENST00000521037 ADAMTS6Q9UKP5 1117 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 STXBP5LQ9Y2K9 1186 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 SYNGAP1Q96PV0 1343 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 SSC5DA1L4H1 1573 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 DUOX1Q9NRD9 1551 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 KDM3BQ7LBC6 1761 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 AKAP11Q9UKA4 1901 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 TTC28Q96AY4 2481 aa5.36□□□□□ -1.55
VPS13B-208ENST00000521037 ZNF609O15014 1411 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 RIC1Q4ADV7 1423 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 ABCC12Q96J65 1359 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 A0A096LPE4 126 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 A0A1W2PPZ6 126 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 E9PSI1 815 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 PHACTR2O75167 634 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 RNASE1P07998 156 aaKnown RBP5.35□□□□□ -1.55
VPS13B-208ENST00000521037 PCSK2P16519 638 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 PLA2G5P39877 138 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 GRIA4P48058 902 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 ZNF157P51786 506 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-208ENST00000521037 PLCL1Q15111 1095 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 POU4F3Q15319 338 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 SPRED3Q2MJR0 410 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 MOB2Q70IA6 237 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 STK11IPQ8N1F8 1099 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 SNX29Q8TEQ0 813 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 ZNF333Q96JL9 665 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 ZFYVE28Q9HCC9 887 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 MTMR10Q9NXD2 777 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 POLKQ9UBT6 870 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 U3KQE9 123 aa5.35□□□□□ -1.55
VPS13B-208ENST00000521037 KIAA0100Q14667 2235 aaKnown RBP5.35□□□□□ -1.55
VPS13B-208ENST00000521037 WTIPA6NIX2 430 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-208ENST00000521037 BIN1O00499 593 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 FARP2O94887 1054 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-208ENST00000521037 CYP11A1P05108 521 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 CD8BP10966 210 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 RAB6AP20340 208 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 CANXP27824 592 aaKnown RBP5.34□□□□□ -1.55
VPS13B-208ENST00000521037 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 CCDC27Q2M243 656 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 INTS3Q68E01 1043 aaKnown RBP5.34□□□□□ -1.55
VPS13B-208ENST00000521037 DYMQ7RTS9 669 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms