RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 CST5P28325 142 aaPredicted RBP18.59■□□□□ 0.57
CLN8-205ENST00000520991 NT5C2P49902 561 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 ZNF543Q08ER8 600 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 IMMTQ16891 758 aaKnown RBP18.59■□□□□ 0.57
CLN8-205ENST00000520991 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 IQCA1Q86XH1 822 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 PCSK9Q8NBP7 692 aaKnown RBP18.59■□□□□ 0.57
CLN8-205ENST00000520991 BADQ92934 168 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 DSCC1Q9BVC3 393 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 KATNBL1Q9H079 304 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 CTNNA3Q9UI47 895 aa18.59■□□□□ 0.57
CLN8-205ENST00000520991 LAMA2P24043 3122 aaKnown RBP18.59■□□□□ 0.57
CLN8-205ENST00000520991 TRIM43BA6NCK2 446 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 KDM4AO75164 1064 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 GJA9P57773 515 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 IRX6P78412 446 aaPredicted RBP18.58■□□□□ 0.57
CLN8-205ENST00000520991 TNFAIP2Q03169 654 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 CCDC178Q5BJE1 867 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 DEFB123Q8N688 67 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 VTI1AQ96AJ9 217 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.57
CLN8-205ENST00000520991 GLT1D1Q96MS3 346 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 UPF3AQ9H1J1 476 aaKnown RBP18.58■□□□□ 0.57
CLN8-205ENST00000520991 PNMA2Q9UL42 364 aa18.58■□□□□ 0.57
CLN8-205ENST00000520991 PTPDC1A2A3K4 754 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 ASGR1P07306 291 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
CLN8-205ENST00000520991 GNASQ5JWF2 1037 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 CCSAPQ6IQ19 270 aaPredicted RBP18.57■□□□□ 0.56
CLN8-205ENST00000520991 DGKHQ86XP1 1220 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 ASTN1O14525 1302 aa18.57■□□□□ 0.56
CLN8-205ENST00000520991 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.56■□□□□ 0.56
CLN8-205ENST00000520991 DCDC2CA8MYV0 355 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 B4E1Z4 1266 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 NFIBO00712 420 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 RAG1P15918 1043 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 PDE4AP27815 886 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 BAATQ14032 418 aaPredicted RBP18.56■□□□□ 0.56
CLN8-205ENST00000520991 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
CLN8-205ENST00000520991 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 EEPD1Q7L9B9 569 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 KAT14Q9H8E8 782 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 ADD3Q9UEY8 706 aaKnown RBP18.56■□□□□ 0.56
CLN8-205ENST00000520991 DDX49Q9Y6V7 483 aaKnown RBP18.56■□□□□ 0.56
CLN8-205ENST00000520991 LRRC37A2A6NM11 1700 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 ELP1O95163 1332 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
CLN8-205ENST00000520991 GOLGA8HP0CJ92 632 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 Q7L0L9 218 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 ANKRD33Q7Z3H0 272 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 TLK2Q86UE8 772 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 FBXO16Q8IX29 292 aaPredicted RBP18.55■□□□□ 0.56
CLN8-205ENST00000520991 PNMA1Q8ND90 353 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 TOX2Q96NM4 488 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 PURBQ96QR8 312 aaKnown RBP18.55■□□□□ 0.56
CLN8-205ENST00000520991 ZSCAN10Q96SZ4 725 aaPredicted RBP18.55■□□□□ 0.56
CLN8-205ENST00000520991 KRT23Q9C075 422 aa18.55■□□□□ 0.56
CLN8-205ENST00000520991 KIAA0355O15063 1070 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
CLN8-205ENST00000520991 CALML3P27482 149 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 FAAP100Q0VG06 881 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 SHHQ15465 462 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 WDR19Q8NEZ3 1342 aa18.54■□□□□ 0.56
CLN8-205ENST00000520991 A0A0U1RQG5 324 aaPredicted RBP18.53■□□□□ 0.56
CLN8-205ENST00000520991 ITGB8P26012 769 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 ALDH5A1P51649 535 aaPredicted RBP18.53■□□□□ 0.56
CLN8-205ENST00000520991 BEX3Q00994 111 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 SLC30A10Q6XR72 485 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 RNF207Q6ZRF8 634 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 ENAHQ8N8S7 591 aaPredicted RBP18.53■□□□□ 0.56
CLN8-205ENST00000520991 RUFY2Q8WXA3 655 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 CLEC4DQ8WXI8 215 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 UBAC1Q9BSL1 405 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 IL25Q9H293 177 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 PDGFCQ9NRA1 345 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 ZSWIM5Q9P217 1185 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
CLN8-205ENST00000520991 COL6A3P12111 3177 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 TNKSO95271 1327 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 RAD50Q92878 1312 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 LCTP09848 1927 aa18.53■□□□□ 0.56
CLN8-205ENST00000520991 CTAGE5O15320 804 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 ZEB2O60315 1214 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 SMPD1P17405 629 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 NKX3-2P78367 333 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
CLN8-205ENST00000520991 USH1GQ495M9 461 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 TAPT1Q6NXT6 567 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 MORC4Q8TE76 937 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 ANKS1AQ92625 1134 aa18.52■□□□□ 0.56
CLN8-205ENST00000520991 MPHOSPH6Q99547 160 aaKnown RBP18.52■□□□□ 0.56
CLN8-205ENST00000520991 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms