RNA–Protein interactions for RNA: ENST00000520986.5

DENND3-215, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-215	ENST00000520986	USH1G	Q495M9	461 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	SGMS1	Q86VZ5	419 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	FAM133A	Q8N9E0	248 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	MTMR8	Q96EF0	704 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	CRISPLD2	Q9H0B8	497 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	CYP39A1	Q9NYL5	469 aa		27.65	■■■□□ 2.02
DENND3-215	ENST00000520986	POTEB2	H3BUK9	544 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	CNTN2	Q02246	1040 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	PRAMEF19	Q5SWL8	479 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	NSMF	Q6X4W1	530 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	ZNF467	Q7Z7K2	595 aa	Predicted RBP	27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	CTCFL	Q8NI51	663 aa	Predicted RBP	27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	RIOX1	Q9H6W3	641 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	LCT	P09848	1927 aa		27.64	■■■□□ 2.02
DENND3-215	ENST00000520986	CYTH3	O43739	400 aa		27.63	■■■□□ 2.01
DENND3-215	ENST00000520986	RXRA	P19793	462 aa		27.63	■■■□□ 2.01
DENND3-215	ENST00000520986	RAB11FIP4	Q86YS3	637 aa		27.63	■■■□□ 2.01
DENND3-215	ENST00000520986	SLC12A7	Q9Y666	1083 aa		27.63	■■■□□ 2.01
DENND3-215	ENST00000520986	FRMPD3	Q5JV73	1810 aa		27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	TFRC	P02786	760 aa	Known RBP	27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	CNGA1	P29973	690 aa		27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	BLOC1S2	Q6QNY1	142 aa		27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	MAMDC4	Q6UXC1	1216 aa		27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	MSL3	Q8N5Y2	521 aa	Known RBP	27.62	■■■□□ 2.01
DENND3-215	ENST00000520986	SOWAHB	A6NEL2	793 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	CALM1	P0DP23	149 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	CALM2	P0DP24	149 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	CALM3	P0DP25	149 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	KIF5B	P33176	963 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	BAAT	Q14032	418 aa	Predicted RBP	27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	LHX8	Q68G74	356 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	FBXO11	Q86XK2	927 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	ABCB11	O95342	1321 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	SYNGAP1	Q96PV0	1343 aa		27.61	■■■□□ 2.01
DENND3-215	ENST00000520986	MCM3AP	O60318	1980 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	ZBTB5	O15062	677 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	PPP1R11	O60927	126 aa	Predicted RBP	27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	APOA5	Q6Q788	366 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	SLC30A10	Q6XR72	485 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	HOMER1	Q86YM7	354 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	CCDC144CP	Q8IYA2	1237 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	PURB	Q96QR8	312 aa	Known RBP	27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	PIGS	Q96S52	555 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	AMN	Q9BXJ7	453 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	NRBP1	Q9UHY1	535 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	OGDHL	Q9ULD0	1010 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	BRPF3	Q9ULD4	1205 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	ASTN1	O14525	1302 aa		27.6	■■■□□ 2.01
DENND3-215	ENST00000520986	PTPDC1	A2A3K4	754 aa		27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	SNAI1	O95863	264 aa	Predicted RBP	27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	CAPN2	P17655	700 aa		27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	CAST	P20810	708 aa	Known RBP	27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	RPS6KB1	P23443	525 aa		27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	PSMA5	P28066	241 aa		27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	MICU3	Q86XE3	530 aa		27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	DDX20	Q9UHI6	824 aa	Known RBP	27.59	■■■□□ 2.01
DENND3-215	ENST00000520986	PLEKHA8P1	O95397	391 aa		27.58	■■■□□ 2.01
DENND3-215	ENST00000520986	RNF207	Q6ZRF8	634 aa		27.58	■■■□□ 2.01
DENND3-215	ENST00000520986	UBE2Q1	Q7Z7E8	422 aa		27.58	■■■□□ 2.01
DENND3-215	ENST00000520986	FANCB	Q8NB91	859 aa		27.58	■■■□□ 2.01
DENND3-215	ENST00000520986	SPZ1	Q9BXG8	430 aa		27.58	■■■□□ 2.01
DENND3-215	ENST00000520986	SEPT4	O43236	478 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	ZNF865	P0CJ78	1059 aa	Predicted RBP	27.57	■■■□□ 2
DENND3-215	ENST00000520986	GNAQ	P50148	359 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	RPS6	P62753	249 aa	Known RBP	27.57	■■■□□ 2
DENND3-215	ENST00000520986	SYNE3	Q6ZMZ3	975 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986		Q6ZUG5	572 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	ARMCX2	Q7L311	632 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	SRBD1	Q8N5C6	995 aa	Known RBP	27.57	■■■□□ 2
DENND3-215	ENST00000520986	LZTS2	Q9BRK4	669 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.57	■■■□□ 2
DENND3-215	ENST00000520986	CNPY2	Q9Y2B0	182 aa		27.57	■■■□□ 2
DENND3-215	ENST00000520986	KLF18	A0A0U1RQI7	1052 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	MSC	O60682	206 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	FARP2	O94887	1054 aa	Predicted RBP	27.56	■■■□□ 2
DENND3-215	ENST00000520986	CALML3	P27482	149 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	SMARCA1	P28370	1054 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	FGD1	P98174	961 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	CMTR1	Q8N1G2	835 aa	Known RBP	27.56	■■■□□ 2
DENND3-215	ENST00000520986	RGS22	Q8NE09	1264 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	ZSWIM6	Q9HCJ5	1215 aa		27.56	■■■□□ 2
DENND3-215	ENST00000520986	MRPL11	Q9Y3B7	192 aa	Known RBP	27.56	■■■□□ 2
DENND3-215	ENST00000520986	PNMA6F	A0A0J9YX94	578 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	ZBTB43	O43298	467 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	ANO1	Q5XXA6	986 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	PIBF1	Q8WXW3	757 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	TBC1D5	Q92609	795 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	PCDHA1	Q9Y5I3	950 aa		27.55	■■■□□ 2
DENND3-215	ENST00000520986	DDX49	Q9Y6V7	483 aa	Known RBP	27.55	■■■□□ 2
DENND3-215	ENST00000520986	ASB14	A6NK59	587 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	LRRC37A2	A6NM11	1700 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	SEC24B	O95487	1268 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	MNX1	P50219	401 aa	Predicted RBP	27.54	■■■□□ 2
DENND3-215	ENST00000520986	TMTC3	Q6ZXV5	915 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	RUFY3	Q7L099	469 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	FBXL16	Q8N461	479 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	ANKLE1	Q8NAG6	615 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	BRF1	Q92994	677 aa		27.54	■■■□□ 2
DENND3-215	ENST00000520986	AGXT2	Q9BYV1	514 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms