RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	RAB33A	Q14088	237 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	KIR3DS1	Q14943	382 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	ADGRF1	Q5T601	910 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	TRIM59	Q8IWR1	403 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	CKAP2L	Q8IYA6	745 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	NUP43	Q8NFH3	380 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	MRGPRX3	Q96LB0	322 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	SLC38A3	Q99624	504 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	LGR4	Q9BXB1	951 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	KCNK12	Q9HB15	430 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	IMPACT	Q9P2X3	320 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	ACSL6	Q9UKU0	697 aa		7.75	□□□□□ -1.17
MSR1-211	ENST00000520846	OR14I1	A6ND48	311 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	ITGAV	P06756	1048 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	CYP4F8	P98187	520 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	LAPTM5	Q13571	262 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	GTF2IRD2B	Q6EKJ0	949 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	GTF2IRD2	Q86UP8	949 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	TRIM55	Q9BYV6	548 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	EPN3	Q9H201	632 aa		7.74	□□□□□ -1.17
MSR1-211	ENST00000520846	C8A	P07357	584 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	L1CAM	P32004	1257 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	ZNF605	Q86T29	641 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	ZNF227	Q86WZ6	799 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	KRTAP9-2	Q9BYQ4	174 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	ZNF552	Q9H707	407 aa	Predicted RBP	7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	GOLGA2P5	Q9HBQ8	144 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	CYP26B1	Q9NR63	512 aa		7.73	□□□□□ -1.17
MSR1-211	ENST00000520846	SDHB	P21912	280 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	MVK	Q03426	396 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	SCRN1	Q12765	414 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	PKN1	Q16512	942 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	SLC10A6	Q3KNW5	377 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	BTN2A2	Q8WVV5	523 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	COPS5	Q92905	334 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	NKX2-4	Q9H2Z4	354 aa		7.72	□□□□□ -1.17
MSR1-211	ENST00000520846	TRBV23OR9-2	A0A075B6M9	112 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	NPHP3-ACAD11	A0A0J9YXS1	232 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	AGRP	O00253	132 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	TBX1	O43435	398 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	MSL3P1	P0C860	447 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	PAM	P19021	973 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	ERVFRD-1	P60508	538 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	SLC26A8	Q96RN1	970 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	PPP1R16B	Q96T49	567 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846	GPRC5C	Q9NQ84	441 aa		7.71	□□□□□ -1.18
MSR1-211	ENST00000520846		A0A1W2PQJ5	194 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	U2SURP	O15042	1029 aa	Known RBP	7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	PEX10	O60683	326 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	MPO	P05164	745 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	CORO7	P57737	925 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	ZNF124	Q15973	351 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	NLGN2	Q8NFZ4	835 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	ARMC5	Q96C12	935 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	PDLIM7	Q9NR12	457 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	CLEC1B	Q9P126	229 aa		7.7	□□□□□ -1.18
MSR1-211	ENST00000520846	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	HRK	O00198	91 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	THBD	P07204	575 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	PLS3	P13797	630 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	HOXC12	P31275	282 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	NBPF6	Q5VWK0	638 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	NPM2	Q86SE8	214 aa	Known RBP	7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	CPNE8	Q86YQ8	564 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	KCNN1	Q92952	543 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	NBPF4	Q96M43	638 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	MCOLN1	Q9GZU1	580 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	TNFRSF12A	Q9NP84	129 aa		7.69	□□□□□ -1.18
MSR1-211	ENST00000520846	MYOCOS	A0A1B0GUC4	107 aa		7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	SNRPB2	P08579	225 aa	Known RBP	7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	TMEM253	P0C7T8	217 aa		7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	YBX1	P67809	324 aa	Known RBP	7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	SF3A1	Q15459	793 aa	Known RBP	7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	TMEM132E	Q6IEE7	984 aa		7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	CCDC140	Q96MF4	163 aa		7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	KRTAP4-12	Q9BQ66	201 aa		7.68	□□□□□ -1.18
MSR1-211	ENST00000520846	NUDT19	A8MXV4	375 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	ABLIM1	O14639	778 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	TSPAN15	O95858	294 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	YBX3	P16989	372 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	TACR1	P25103	407 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	ECI1	P42126	302 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	CYP4F3	Q08477	520 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	TMEM62	Q0P6H9	643 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	RAB3GAP1	Q15042	981 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	OLFML2B	Q68BL8	750 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	BICRAL	Q6AI39	1079 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	NPLOC4	Q8TAT6	608 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	FRS2	Q8WU20	508 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	MMP19	Q99542	508 aa		7.67	□□□□□ -1.18
MSR1-211	ENST00000520846	KRTAP9-6	A0A140TA67	174 aa		7.66	□□□□□ -1.18
MSR1-211	ENST00000520846	TEX51	A0A1B0GUA7	166 aa		7.66	□□□□□ -1.18
MSR1-211	ENST00000520846		A0A1W2PQU0	124 aa		7.66	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms