RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 TRIM22Q8IYM9 498 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 FAM177A1Q8N128 213 aaPredicted RBP20.13■□□□□ 0.81
TRAM1-203ENST00000520700 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 ACAD9Q9H845 621 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 PRDM10Q9NQV6 1147 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 RNF146Q9NTX7 359 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 MRPL11Q9Y3B7 192 aaKnown RBP20.13■□□□□ 0.81
TRAM1-203ENST00000520700 SLC15A5A6NIM6 579 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 ALAS1P13196 640 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 HOXD10P28358 340 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 LBX1P52954 281 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 PRMT2P55345 433 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 AKAP17AQ02040 695 aaKnown RBP20.12■□□□□ 0.81
TRAM1-203ENST00000520700 CD99L2Q8TCZ2 262 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 USP6NLQ92738 828 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 PHKBQ93100 1093 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 COA7Q96BR5 231 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 MAP3K20Q9NYL2 800 aaKnown RBP20.12■□□□□ 0.81
TRAM1-203ENST00000520700 GJD2Q9UKL4 321 aa20.12■□□□□ 0.81
TRAM1-203ENST00000520700 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
TRAM1-203ENST00000520700 DEXIO95424 95 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 FCER1AP12319 257 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 SCG2P13521 617 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 CAP1Q01518 475 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 CUL4AQ13619 759 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 GRB14Q14449 540 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 MORN1Q5T089 497 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 NSUN7Q8NE18 718 aaKnown RBP20.11■□□□□ 0.81
TRAM1-203ENST00000520700 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 SLC26A6Q9BXS9 759 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 ARHGAP39Q9C0H5 1083 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 IVNS1ABPQ9Y6Y0 642 aa20.11■□□□□ 0.81
TRAM1-203ENST00000520700 MUM1L1Q5H9M0 696 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 MCF2L2Q86YR7 1114 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 SOCS4Q8WXH5 440 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 SH3GLB2Q9NR46 395 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
TRAM1-203ENST00000520700 hCG_1642624A0A1W2PR95 340 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 HOXC6P09630 235 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 KCTD2Q14681 263 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 USH1GQ495M9 461 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 CCDC83Q8IWF9 413 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 SRRDQ9UH36 339 aa20.09■□□□□ 0.81
TRAM1-203ENST00000520700 DIS3Q9Y2L1 958 aaKnown RBP20.09■□□□□ 0.81
TRAM1-203ENST00000520700 PFASO15067 1338 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 DNAJC25-GNG10A0A024R161 153 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 K7ELQ4 463 aaPredicted RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 OPLAHO14841 1288 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 FDPSP14324 419 aaKnown RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 IRF5Q13568 498 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 WWC2Q6AWC2 1192 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 WASF1Q92558 559 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 MMP19Q99542 508 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 GLT8D2Q9H1C3 349 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 A1CFQ9NQ94 594 aaKnown RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 HOMER2Q9NSB8 354 aa20.08■□□□□ 0.81
TRAM1-203ENST00000520700 ORC3Q9UBD5 711 aaPredicted RBP20.08■□□□□ 0.81
TRAM1-203ENST00000520700 SMCHD1A6NHR9 2005 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 ESYT2A0FGR8 921 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 STXBP3O00186 592 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 NFIBO00712 420 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 SLC4A3P48751 1232 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 MAP2K5Q13163 448 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 OTOP1Q7RTM1 612 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 ANKRD35Q8N283 1001 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 CCDC12Q8WUD4 166 aaPredicted RBP20.07■□□□□ 0.8
TRAM1-203ENST00000520700 CWC22Q9HCG8 908 aaKnown RBP20.07■□□□□ 0.8
TRAM1-203ENST00000520700 SLC5A4Q9NY91 659 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 CYP39A1Q9NYL5 469 aa20.07■□□□□ 0.8
TRAM1-203ENST00000520700 PIK3CDO00329 1044 aa20.06■□□□□ 0.8
TRAM1-203ENST00000520700 ADORA2AP29274 412 aa20.06■□□□□ 0.8
TRAM1-203ENST00000520700 HSD17B4P51659 736 aa20.06■□□□□ 0.8
TRAM1-203ENST00000520700 HEATR3Q7Z4Q2 680 aa20.06■□□□□ 0.8
TRAM1-203ENST00000520700 CTU1Q7Z7A3 348 aaKnown RBP20.06■□□□□ 0.8
TRAM1-203ENST00000520700 DDX11Q96FC9 970 aa20.06■□□□□ 0.8
TRAM1-203ENST00000520700 INTS4Q96HW7 963 aaKnown RBP20.06■□□□□ 0.8
TRAM1-203ENST00000520700 MGAMO43451 1857 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 ZNF236Q9UL36 1845 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 JAK2O60674 1132 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 TAL1P17542 331 aaPredicted RBP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 RGS2P41220 211 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 BAATQ14032 418 aaPredicted RBP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 PKN2Q16513 984 aaKnown RBP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 TYW1BQ6NUM6 668 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 RNF207Q6ZRF8 634 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 ZNF467Q7Z7K2 595 aaPredicted RBP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 FAM133AQ8N9E0 248 aa20.05■□□□□ 0.8
TRAM1-203ENST00000520700 GPKOWQ92917 476 aaPredicted RBP eCLIP20.05■□□□□ 0.8
TRAM1-203ENST00000520700 ZMYND12Q9H0C1 365 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms