RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PUS7LQ9H0K6 701 aaKnown RBP5.86□□□□□ -1.47
SDC2-204ENST00000519914 KCNF1Q9H3M0 494 aa5.86□□□□□ -1.47
SDC2-204ENST00000519914 GREM2Q9H772 168 aa5.86□□□□□ -1.47
SDC2-204ENST00000519914 SLC6A14Q9UN76 642 aa5.86□□□□□ -1.47
SDC2-204ENST00000519914 COL24A1Q17RW2 1714 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 SCN7AQ01118 1682 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 UBN2Q6ZU65 1347 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 PNPLA7Q6ZV29 1317 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 MYH6P13533 1939 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 C9orf172C9J069 976 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 ZNF213O14771 459 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 PRC1O43663 620 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 NEMFO60524 1076 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 SELPP16109 830 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 RASA1P20936 1047 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 LIFRP42702 1097 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 HIRAP54198 1017 aaPredicted RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 DHX8Q14562 1220 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 PUM3Q15397 648 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 ANO6Q4KMQ2 910 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 METTL24Q5JXM2 366 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 TTLL5Q6EMB2 1281 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 LDHAL6AQ6ZMR3 332 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 CCAR1Q8IX12 1150 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 DMRTC2Q8IXT2 367 aaPredicted RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 FMR1NBQ8N0W7 255 aaPredicted RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 BICD2Q8TD16 824 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 MRPS27Q92552 414 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 TIGD1Q96MW7 591 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 LRRC2Q9BYS8 371 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 GOLPH3LQ9H4A5 285 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 ANO10Q9NW15 660 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 TFIP11Q9UBB9 837 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 ZBTB1Q9Y2K1 713 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 R3HCC1Q9Y3T6 440 aaKnown RBP5.85□□□□□ -1.47
SDC2-204ENST00000519914 CACNA1SQ13698 1873 aa5.85□□□□□ -1.47
SDC2-204ENST00000519914 KLF18A0A0U1RQI7 1052 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 M0R2N6 131 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 IGSF3O75054 1194 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 PPP6R2O75170 966 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 CDKL5O76039 1030 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 DKK1O94907 266 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 KIF20AO95235 890 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 PDE6AP16499 860 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 GNAT2P19087 354 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 U2AF2P26368 475 aaKnown RBP eCLIP5.84□□□□□ -1.47
SDC2-204ENST00000519914 ZNF165P49910 485 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 RBM6P78332 1123 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 CCT2P78371 535 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 FKBP4Q02790 459 aaKnown RBP eCLIP5.84□□□□□ -1.47
SDC2-204ENST00000519914 NTRK3Q16288 839 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 AXDND1Q5T1B0 1012 aaPredicted RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 GORABQ5T7V8 394 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 PSAPL1Q6NUJ1 521 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 INTS5Q6P9B9 1019 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 CCDC73Q6ZRK6 1079 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 RALYLQ86SE5 291 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 SIX5Q8N196 739 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 DDX11Q96FC9 970 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 C8orf76Q96K31 380 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 STRBPQ96SI9 672 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 C2orf49Q9BVC5 232 aaPredicted RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 TTC12Q9H892 705 aaPredicted RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 NCOA5Q9HCD5 579 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 PIH1D3Q9NQM4 214 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 DNAJB12Q9NXW2 375 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 BTG4Q9NY30 223 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 USP21Q9UK80 565 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 NAP1L2Q9ULW6 460 aaPredicted RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 PCDHA7Q9UN72 937 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 ANGEL1Q9UNK9 670 aaKnown RBP5.84□□□□□ -1.47
SDC2-204ENST00000519914 HPSEQ9Y251 543 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 MAST2Q6P0Q8 1798 aa5.84□□□□□ -1.47
SDC2-204ENST00000519914 LAMB1P07942 1786 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 ZNF804BA4D1E1 1349 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 PDS5AQ29RF7 1337 aaKnown RBP5.83□□□□□ -1.48
SDC2-204ENST00000519914 MYH13Q9UKX3 1938 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 UQCRHLA0A096LP55 91 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 GOLGA8BA8MQT2 603 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 PATL2C9JE40 543 aaKnown RBP5.83□□□□□ -1.48
SDC2-204ENST00000519914 EXOC5O00471 708 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 MYO1BO43795 1136 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 KINO60870 393 aaKnown RBP5.83□□□□□ -1.48
SDC2-204ENST00000519914 CAMTA2O94983 1202 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 UQCRHP07919 91 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 SLC5A1P13866 664 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 NFKB1P19838 968 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 CMA1P23946 247 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 PHKA1P46020 1223 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 KCNJ6P48051 423 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 NT5C2P49902 561 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 RAC1P63000 192 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 TRDNQ13061 729 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 MBTPS1Q14703 1052 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 SLC39A14Q15043 492 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 PPP2R5BQ15173 497 aa5.83□□□□□ -1.48
SDC2-204ENST00000519914 SYCP1Q15431 976 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms