RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 MFSD14CQ5VZR4 134 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 LHX8Q68G74 356 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 DPP9Q86TI2 863 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 KATNBL1Q9H079 304 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPIDR-212ENST00000519661 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 HMX1Q9NP08 348 aaPredicted RBP13.42□□□□□ -0.26
SPIDR-212ENST00000519661 OGDHLQ9ULD0 1010 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
SPIDR-212ENST00000519661 ASTN1O14525 1302 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 OPLAHO14841 1288 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 SGPL1O95470 568 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 EDNRBP24530 442 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 NKX3-2P78367 333 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 TRIM32Q13049 653 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 MUM1L1Q5H9M0 696 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 WDR78Q5VTH9 848 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 TMTC3Q6ZXV5 915 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
SPIDR-212ENST00000519661 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
SPIDR-212ENST00000519661 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
SPIDR-212ENST00000519661 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
SPIDR-212ENST00000519661 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 NFIBO00712 420 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
SPIDR-212ENST00000519661 PGK2P07205 417 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 ALAS1P13196 640 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 HSD17B4P51659 736 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 DNERQ8NFT8 737 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
SPIDR-212ENST00000519661 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 CPVLQ9H3G5 476 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
SPIDR-212ENST00000519661 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
SPIDR-212ENST00000519661 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
SPIDR-212ENST00000519661 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 SEPT4O43236 478 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 SNAI1O95863 264 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-212ENST00000519661 ZNF865P0CJ78 1059 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-212ENST00000519661 CYP2C19P33261 490 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-212ENST00000519661 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 MRPL11Q9Y3B7 192 aaKnown RBP13.39□□□□□ -0.27
SPIDR-212ENST00000519661 LCTP09848 1927 aa13.39□□□□□ -0.27
SPIDR-212ENST00000519661 ASB14A6NK59 587 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 SNAP25P60880 206 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 RPS6P62753 249 aaKnown RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 ABHD16BQ9H3Z7 469 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 ZNFX1Q9P2E3 1918 aaKnown RBP13.38□□□□□ -0.27
SPIDR-212ENST00000519661 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 FRMPD4Q14CM0 1322 aa13.38□□□□□ -0.27
SPIDR-212ENST00000519661 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 PIK3CDO00329 1044 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 ZBTB43O43298 467 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 COL6A1P12109 1028 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 SOX10P56693 466 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 CNTN2Q02246 1040 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 BAATQ14032 418 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 TOB2Q14106 344 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 ZNF274Q96GC6 653 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 PIGSQ96S52 555 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 HOMER2Q9NSB8 354 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
SPIDR-212ENST00000519661 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
SPIDR-212ENST00000519661 LRRC37A2A6NM11 1700 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 PLEKHA8P1O95397 391 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 SEC24BO95487 1268 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms