RNA–Protein interactions for RNA: ENST00000519531.5

ARFGAP1-211, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 3

Gene ARFGAP1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-211ENST00000519531 PFKFB2O60825 505 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 PPFIA3O75145 1194 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 LARGE1O95461 756 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 ADORA2AP29274 412 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 GRB14Q14449 540 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 KCTD2Q14681 263 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 SOCS4Q8WXH5 440 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 PTPN22Q9Y2R2 807 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 V9GY48 417 aaPredicted RBP20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 CPLX1O14810 134 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 SCRN1Q12765 414 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 NECAB1Q8N987 351 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 RAET1EQ8TD07 263 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 PCDHA1Q9Y5I3 950 aa20.88■□□□□ 0.93
ARFGAP1-211ENST00000519531 MYH6P13533 1939 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 ABCB11O95342 1321 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 NFIBO00712 420 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 PGK2P07205 417 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 CYP2B6P20813 491 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 PRMT2P55345 433 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 MAP2K5Q13163 448 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 NTRK3Q16288 839 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 COL13A1Q5TAT6 717 aaPredicted RBP20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 ABRAQ8N0Z2 381 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 ANKRD35Q8N283 1001 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 CLEC4DQ8WXI8 215 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 USP6NLQ92738 828 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 PHKBQ93100 1093 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 PTCH2Q9Y6C5 1203 aa20.87■□□□□ 0.93
ARFGAP1-211ENST00000519531 RGS2P41220 211 aa20.86■□□□□ 0.93
ARFGAP1-211ENST00000519531 NSMFQ6X4W1 530 aa20.86■□□□□ 0.93
ARFGAP1-211ENST00000519531 DPP9Q86TI2 863 aa20.86■□□□□ 0.93
ARFGAP1-211ENST00000519531 DDX11Q96FC9 970 aa20.86■□□□□ 0.93
ARFGAP1-211ENST00000519531 MRPL11Q9Y3B7 192 aaKnown RBP20.86■□□□□ 0.93
ARFGAP1-211ENST00000519531 PLXNB2O15031 1838 aa20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 COBLO75128 1261 aa20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 IFNAR1P17181 557 aa20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 PKN2Q16513 984 aaKnown RBP20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 SLC26A6Q9BXS9 759 aa20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 A1CFQ9NQ94 594 aaKnown RBP20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 HTTP42858 3142 aa20.85■□□□□ 0.93
ARFGAP1-211ENST00000519531 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 AKAP17AQ02040 695 aaKnown RBP20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 TRAF1Q13077 416 aa20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 CPLX2Q6PUV4 134 aaKnown RBP20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.84■□□□□ 0.933e-6■■■□□ 16.5
ARFGAP1-211ENST00000519531 HEATR3Q7Z4Q2 680 aa20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 GPKOWQ92917 476 aaPredicted RBP eCLIP20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 GTF3C6Q969F1 213 aa20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 MCOLN1Q9GZU1 580 aa20.84■□□□□ 0.93
ARFGAP1-211ENST00000519531 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 DTNBO60941 627 aa20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 IRF5Q13568 498 aa20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 IL27Q8NEV9 243 aa20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 ZSCAN31Q96LW9 406 aaPredicted RBP20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 APBA2Q99767 749 aa20.83■□□□□ 0.93
ARFGAP1-211ENST00000519531 PFASO15067 1338 aa20.83■□□□□ 0.92
ARFGAP1-211ENST00000519531 PRPF3O43395 683 aaKnown RBP20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 ADCY3O60266 1144 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 ELNP15502 786 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 SSRP1Q08945 709 aaKnown RBP20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 BAATQ14032 418 aaPredicted RBP20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 NPLOC4Q8TAT6 608 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 TBC1D5Q92609 795 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 RNF26Q9BY78 433 aaPredicted RBP20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 SLC5A4Q9NY91 659 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 CYP39A1Q9NYL5 469 aa20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
ARFGAP1-211ENST00000519531 HOXC6P09630 235 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 XRCC5P13010 732 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CCL14Q16627 93 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 WWC2Q6AWC2 1192 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 RNF207Q6ZRF8 634 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 MCF2L2Q86YR7 1114 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 TRIM22Q8IYM9 498 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 SH2B1Q9NRF2 756 aaPredicted RBP20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 DNAJC25-GNG10A0A024R161 153 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 POTEB2H3BUK9 544 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 OPLAHO14841 1288 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CDKL5O76039 1030 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CTDNEP1O95476 244 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CFBP00751 764 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CALML3P27482 149 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 RPS6P62753 249 aaKnown RBP20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CNTN2Q02246 1040 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 ST3GAL1Q11201 340 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 PKN1Q16512 942 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 PFKFB3Q16875 520 aaPredicted RBP20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 SLC30A10Q6XR72 485 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 CCDC83Q8IWF9 413 aa20.81■□□□□ 0.92
ARFGAP1-211ENST00000519531 ZNF236Q9UL36 1845 aa20.8■□□□□ 0.92
ARFGAP1-211ENST00000519531 SCG2P13521 617 aa20.8■□□□□ 0.92
ARFGAP1-211ENST00000519531 GRK4P32298 578 aa20.8■□□□□ 0.92
ARFGAP1-211ENST00000519531 SLC9C1Q4G0N8 1177 aa20.8■□□□□ 0.92
ARFGAP1-211ENST00000519531 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
ARFGAP1-211ENST00000519531 SH3TC2Q8TF17 1288 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms