RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 CCDC197Q8NCU1 140 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 KRIT1O00522 736 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 MEFVO15553 781 aaPredicted RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 N4BP1O75113 896 aaKnown RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 TNNI2P48788 182 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 ANTXR2P58335 489 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 NBPF9Q3BBW0 867 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 LRRC31Q6UY01 552 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 BICDL1Q6ZP65 573 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 P3H4Q92791 437 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 HOMER3Q9NSC5 361 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 TECPR2O15040 1411 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 EHHADHQ08426 723 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 TBX2Q13207 712 aaPredicted RBP9.39□□□□□ -0.91
PCM1-212ENST00000519253 DENND2CQ68D51 928 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 MYOCDQ8IZQ8 938 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 ERBB3P21860 1342 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 KIDINS220Q9ULH0 1771 aa9.39□□□□□ -0.91
PCM1-212ENST00000519253 RGS16O15492 202 aaPredicted RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 MOCS3O95396 460 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 DRP2Q13474 957 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 RNF10Q8N5U6 811 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 GYPCP04921 128 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 ZNF18P17022 549 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 CUL1Q13616 776 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 FAM114A2Q9NRY5 505 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 GDAQ9Y2T3 454 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 SALL1Q9NSC2 1324 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 NEBLO76041 1014 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 CHGBP05060 677 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 INTS8Q75QN2 995 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 CCDC63Q8NA47 563 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 PIH1D3Q9NQM4 214 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 BIRC3Q13489 604 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 SEL1L2Q5TEA6 688 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 C6orf163Q5TEZ5 329 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 HS2ST1Q7LGA3 356 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 DYMQ7RTS9 669 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.38□□□□□ -0.912e-8■■■■□ 26.6
PCM1-212ENST00000519253 LSM14BQ9BX40 385 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 TRIM31Q9BZY9 425 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 KCNK9Q9NPC2 374 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 BZW2Q9Y6E2 419 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 MCAMP43121 646 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 CUL4BQ13620 913 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 INF2Q27J81 1249 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 RIC8AQ9NPQ8 531 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 CPSF2Q9P2I0 782 aaKnown RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
PCM1-212ENST00000519253 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
PCM1-212ENST00000519253 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 USP17L21D6R901 530 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 EPB41P11171 864 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 GBP1P32455 592 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SPATA4Q8NEY3 305 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 NFU1Q9UMS0 254 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SNX12Q9UMY4 172 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 DNAJC10Q8IXB1 793 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 UBL4BQ8N7F7 174 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 PBKQ96KB5 322 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 NDST4Q9H3R1 872 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 GREM2Q9H772 168 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 EXOC5O00471 708 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 RPS6KA5O75582 802 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 H2AFZP0C0S5 128 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 CASP1P29466 404 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 CXCR5P32302 372 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 HERC4Q5GLZ8 1057 aaPredicted RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 H2AFVQ71UI9 128 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 ILDR1Q86SU0 546 aaPredicted RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 NIP7Q9Y221 180 aaKnown RBP eCLIP9.37□□□□□ -0.91
PCM1-212ENST00000519253 NEDD4P46934 1319 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 PRCPP42785 496 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SSR1P43307 286 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 MRPL12P52815 198 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 EIF3BP55884 814 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 FOXO4P98177 505 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 DPYDQ12882 1025 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 SLMAPQ14BN4 828 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 GSPT2Q8IYD1 628 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 OSBPL9Q96SU4 736 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
PCM1-212ENST00000519253 CTDP1Q9Y5B0 961 aaPredicted RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 PGRMC1O00264 195 aaKnown RBP9.37□□□□□ -0.91
PCM1-212ENST00000519253 PPP1R37O75864 691 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms