RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CDC45	O75419	566 aa		28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885	MRPL12	P52815	198 aa	Known RBP	28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885	TRAF1	Q13077	416 aa		28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885	UBA5	Q9GZZ9	404 aa		28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885	LSG1	Q9H089	658 aa	Known RBP	28.2	■■■□□ 2.1
CNOT7-204	ENST00000518885	DUSP11	O75319	330 aa	Known RBP	28.19	■■■□□ 2.1
CNOT7-204	ENST00000518885	CDC37	Q16543	378 aa	Predicted RBP	28.19	■■■□□ 2.1
CNOT7-204	ENST00000518885	RNF207	Q6ZRF8	634 aa		28.19	■■■□□ 2.1
CNOT7-204	ENST00000518885	ADGRF4	Q8IZF3	695 aa		28.19	■■■□□ 2.1
CNOT7-204	ENST00000518885	FGD4	Q96M96	766 aa		28.19	■■■□□ 2.1
CNOT7-204	ENST00000518885	ABCB11	O95342	1321 aa		28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	SOWAHB	A6NEL2	793 aa		28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	BAAT	Q14032	418 aa	Predicted RBP	28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	TMEM67	Q5HYA8	995 aa		28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	CATIP	Q7Z7H3	387 aa		28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	RGS22	Q8NE09	1264 aa		28.18	■■■□□ 2.1
CNOT7-204	ENST00000518885	NFIB	O00712	420 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	MCM5	P33992	734 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	CCDC144B	Q3MJ40	725 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	USH1G	Q495M9	461 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	HABP4	Q5JVS0	413 aa	Known RBP	28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	CHRDL2	Q6WN34	429 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	MCF2L2	Q86YR7	1114 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	TMTC2	Q8N394	836 aa		28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	TSEN34	Q9BSV6	310 aa	Known RBP	28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	COLQ	Q9Y215	455 aa	Predicted RBP	28.17	■■■□□ 2.1
CNOT7-204	ENST00000518885	KLRF2	D3W0D1	207 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	PGK1	P00558	417 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	LRRC26	Q2I0M4	334 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	FBXO11	Q86XK2	927 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	PRKAG2	Q9UGJ0	569 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	PHF24	Q9UPV7	400 aa		28.16	■■■□□ 2.1
CNOT7-204	ENST00000518885	CEP290	O15078	2479 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	CALML3	P27482	149 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	ADCYAP1R1	P41586	468 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	MB21D2	Q8IYB1	491 aa	Predicted RBP	28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	DNER	Q8NFT8	737 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	CLEC4D	Q8WXI8	215 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	VTA1	Q9NP79	307 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	MRPL11	Q9Y3B7	192 aa	Known RBP	28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	SYNRG	Q9UMZ2	1314 aa		28.15	■■■□□ 2.1
CNOT7-204	ENST00000518885	MOXD2P	A6NHM9	499 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	SLC27A2	O14975	620 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	CENPB	P07199	599 aa	Predicted RBP	28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	ATN1	P54259	1190 aa	Predicted RBP	28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	CREB3L3	Q68CJ9	461 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	STOX1	Q6ZVD7	989 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	PCSK9	Q8NBP7	692 aa	Known RBP	28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	NUP133	Q8WUM0	1156 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	TMEM87B	Q96K49	555 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	VAT1L	Q9HCJ6	419 aa		28.14	■■■□□ 2.1
CNOT7-204	ENST00000518885	PALM3	A6NDB9	673 aa	Predicted RBP	28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	ADAMTS4	O75173	837 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	ALDH5A1	P51649	535 aa	Predicted RBP	28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	TNFAIP2	Q03169	654 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	GRM4	Q14833	912 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	NECTIN1	Q15223	517 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	QRICH1	Q2TAL8	776 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	ERICH6B	Q5W0A0	696 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	SLC39A5	Q6ZMH5	540 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	NOL8	Q76FK4	1167 aa	Known RBP	28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	MORC4	Q8TE76	937 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	AMN	Q9BXJ7	453 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	CPVL	Q9H3G5	476 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	JMJD4	Q9H9V9	463 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885	MAD2L2	Q9UI95	211 aa		28.13	■■■□□ 2.09
CNOT7-204	ENST00000518885		A0A1W2PPC1	479 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	KIF5B	P33176	963 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	RPS6	P62753	249 aa	Known RBP	28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	C1orf53	Q5VUE5	145 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	IQSEC1	Q6DN90	963 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	CHST3	Q7LGC8	479 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	SKAP1	Q86WV1	359 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	MAP3K14	Q99558	947 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	TAF6L	Q9Y6J9	622 aa		28.12	■■■□□ 2.09
CNOT7-204	ENST00000518885	PRC1	O43663	620 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	C6orf222	P0C671	652 aa	Predicted RBP	28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	CST5	P28325	142 aa	Predicted RBP	28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	GJA9	P57773	515 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	RTP1	P59025	263 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	SLC30A10	Q6XR72	485 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	NFXL1	Q6ZNB6	911 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	CTCFL	Q8NI51	663 aa	Predicted RBP	28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	FERMT2	Q96AC1	680 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	KATNBL1	Q9H079	304 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	AP5M1	Q9H0R1	490 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	ATP11B	Q9Y2G3	1177 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	ALPK3	Q96L96	1907 aa		28.11	■■■□□ 2.09
CNOT7-204	ENST00000518885	CCDC69	A6NI79	296 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	ZBTB5	O15062	677 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	DDAH1	O94760	285 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	PDE4D	Q08499	809 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	STAG2	Q8N3U4	1231 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	IGDCC4	Q8TDY8	1250 aa		28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	LENG1	Q96BZ8	264 aa	Predicted RBP	28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	UPF3A	Q9H1J1	476 aa	Known RBP	28.1	■■■□□ 2.09
CNOT7-204	ENST00000518885	CALM1	P0DP23	149 aa		28.09	■■■□□ 2.09
CNOT7-204	ENST00000518885	CALM2	P0DP24	149 aa		28.09	■■■□□ 2.09
CNOT7-204	ENST00000518885	CALM3	P0DP25	149 aa		28.09	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms