RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 DDB1Q16531 1140 aa18.53■□□□□ 0.56
PCDHGA11-202ENST00000518882 MIIPQ5JXC2 388 aa18.53■□□□□ 0.56
PCDHGA11-202ENST00000518882 DHTKD1Q96HY7 919 aaPredicted RBP18.53■□□□□ 0.56
PCDHGA11-202ENST00000518882 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
PCDHGA11-202ENST00000518882 MKRN1Q9UHC7 482 aaKnown RBP18.53■□□□□ 0.56
PCDHGA11-202ENST00000518882 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 FCER1AP12319 257 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 TXNRD1Q16881 649 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 CLEC4GQ6UXB4 293 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 DAGLBQ8NCG7 672 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 P2RX5Q93086 422 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 ZFP91Q96JP5 570 aaPredicted RBP18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 GDAP1L1Q96MZ0 367 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 MED4Q9NPJ6 270 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 BARHL2Q9NY43 387 aa18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 CWC15Q9P013 229 aaKnown RBP18.52■□□□□ 0.56
PCDHGA11-202ENST00000518882 ZNF263O14978 683 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 TRIM66O15016 1216 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 MYBL2P10244 700 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 CYLC1P35663 651 aaPredicted RBP18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 PDE4DQ08499 809 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 LEKR1Q6ZMV7 388 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 GSPT2Q8IYD1 628 aaKnown RBP18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 TRIM9Q9C026 710 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 CPVLQ9H3G5 476 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 HPCAL4Q9UM19 191 aa18.52■□□□□ 0.55
PCDHGA11-202ENST00000518882 EIF3CLB5ME19 914 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 RNF40O75150 1001 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCNE1P24864 410 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 TNNT3P45378 269 aaPredicted RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 AARSP49588 968 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 ZBED6P86452 979 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCDC178Q5BJE1 867 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 CABP7Q86V35 215 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 SLC44A5Q8NCS7 719 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 ANKS1AQ92625 1134 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 HPS3Q969F9 1004 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 PURBQ96QR8 312 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 EIF3CQ99613 913 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 VIPAS39Q9H9C1 493 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 MACROD2A1Z1Q3 448 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 MYO1CO00159 1063 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 PLEKP08567 350 aaPredicted RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 GOLGA8HP0CJ92 632 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 KCNQ4P56696 695 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 RPS8P62241 208 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 SRLQ86TD4 932 aa18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 NOC3LQ8WTT2 800 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-202ENST00000518882 KCNQ2O43526 872 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 PRPHP41219 470 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 SLC20A2Q08357 652 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 KRT26Q7Z3Y9 468 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCDC170Q8IYT3 715 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 EHBP1Q8NDI1 1231 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 RIN2Q8WYP3 895 aaPredicted RBP18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 NUP58Q9BVL2 599 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 ZNHIT6Q9NWK9 470 aaKnown RBP18.5■□□□□ 0.55
PCDHGA11-202ENST00000518882 TARSL2A2RTX5 802 aaKnown RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 LAD1O00515 517 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 RPS6KA5O75582 802 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 MTIF2P46199 727 aaKnown RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 DZIP1Q86YF9 867 aaKnown RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 RETREG2Q8NC44 543 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 PCMTD1Q96MG8 357 aaPredicted RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 IDEP14735 1019 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 ASIC1P78348 528 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 ZSCAN29Q8IWY8 852 aaPredicted RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 LINC00116Q8NCU8 138 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 MKNK2Q9HBH9 465 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 LRWD1Q9UFC0 647 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 RRP15Q9Y3B9 282 aaKnown RBP18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 NAV1Q8NEY1 1877 aa18.49■□□□□ 0.55
PCDHGA11-202ENST00000518882 SBF2Q86WG5 1849 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 CCNT1O60563 726 aaKnown RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 GNAQP50148 359 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 CKAP4Q07065 602 aaKnown RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 C2orf54Q08AI8 447 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 LETM2Q2VYF4 491 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 GALNT17Q6IS24 598 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 LRRC31Q6UY01 552 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 C10orf67Q8IYJ2 551 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 KIAA0895Q8NCT3 520 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 COG1Q8WTW3 980 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 BBXQ8WY36 941 aaPredicted RBP18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 RPGRIP1Q96KN7 1286 aa18.48■□□□□ 0.55
PCDHGA11-202ENST00000518882 C7orf25Q9BPX7 421 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms