RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 FBXO11Q86XK2 927 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 ABRAQ8N0Z2 381 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 TRERF1Q96PN7 1200 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 AMNQ9BXJ7 453 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 ACAD9Q9H845 621 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 HOMER2Q9NSB8 354 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 GABRQQ9UN88 632 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 ABCB11O95342 1321 aa14.55□□□□□ -0.08
IGHV3-6-201ENST00000518407 hCG_1642624A0A1W2PR95 340 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 NFIBO00712 420 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 OPLAHO14841 1288 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 PRKCZQ05513 592 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 PKN1Q16512 942 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 CTU1Q7Z7A3 348 aaKnown RBP14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 NECAB1Q8N987 351 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 SOCS4Q8WXH5 440 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 PIBF1Q8WXW3 757 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 PHKBQ93100 1093 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 COA7Q96BR5 231 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 ZSCAN31Q96LW9 406 aaPredicted RBP14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 FBXO40Q9UH90 709 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
IGHV3-6-201ENST00000518407 STK36Q9NRP7 1315 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 DNAJC25-GNG10A0A024R161 153 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 STRNO43815 780 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 ADORA2AP29274 412 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 GHRHRQ02643 423 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 MMP19Q99542 508 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 SH2B1Q9NRF2 756 aaPredicted RBP14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 SEC63Q9UGP8 760 aaKnown RBP14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 IVNS1ABPQ9Y6Y0 642 aa14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 V9GY48 417 aaPredicted RBP14.53□□□□□ -0.08
IGHV3-6-201ENST00000518407 COBLO75128 1261 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 HOXC6P09630 235 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 FCER1AP12319 257 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 FLT3LGP49771 235 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 PRMT2P55345 433 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 IRF5Q13568 498 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 ARHGEF6Q15052 776 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 WWC2Q6AWC2 1192 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 TYW1BQ6NUM6 668 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 SHISA4Q96DD7 197 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 FGD4Q96M96 766 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 NUDT12Q9BQG2 462 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 SLC26A6Q9BXS9 759 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 PCDHA1Q9Y5I3 950 aa14.52□□□□□ -0.09
IGHV3-6-201ENST00000518407 PFASO15067 1338 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 hCG_1984214I3L0E3 225 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 STXBP3O00186 592 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 CPLX1O14810 134 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 PPFIA3O75145 1194 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 IGHA2P01877 340 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 SCG2P13521 617 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 HOXD10P28358 340 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 MCM2P49736 904 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 SLC30A10Q6XR72 485 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 CCDC83Q8IWF9 413 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 ZNF713Q8N859 430 aaPredicted RBP14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 RGS22Q8NE09 1264 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 NPLOC4Q8TAT6 608 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 TMX3Q96JJ7 454 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 APBA2Q99767 749 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 MAF1Q9H063 256 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 CWC22Q9HCG8 908 aaKnown RBP14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 MRPL11Q9Y3B7 192 aaKnown RBP14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
IGHV3-6-201ENST00000518407 ASTN1O14525 1302 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 DTNBO60941 627 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 CDKL5O76039 1030 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 PGK2P07205 417 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 XRCC5P13010 732 aaKnown RBP14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 RGS2P41220 211 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 HSD17B4P51659 736 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 TRAF1Q13077 416 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 KCTD2Q14681 263 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 ZNF792Q3KQV3 632 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 PPP1R18Q6NYC8 613 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 CPLX2Q6PUV4 134 aaKnown RBP14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 FAM133AQ8N9E0 248 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 SMARCC2Q8TAQ2 1214 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 TBC1D5Q92609 795 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
IGHV3-6-201ENST00000518407 DOCK5Q9H7D0 1870 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms