RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 GAKO14976 1311 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 GSC2O15499 205 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 NID1P14543 1247 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 MPSTP25325 297 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 ATXN1P54253 815 aaKnown RBP4.59□□□□□ -1.67
CPNE3-204ENST00000517862 PRKCZQ05513 592 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 MAST2Q6P0Q8 1798 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 KCNG4Q8TDN1 519 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 TONSLQ96HA7 1378 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 PBX4Q9BYU1 374 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 UPF3BQ9BZI7 483 aaKnown RBP4.59□□□□□ -1.67
CPNE3-204ENST00000517862 ANGPTL2Q9UKU9 493 aa4.59□□□□□ -1.67
CPNE3-204ENST00000517862 ANGEL1Q9UNK9 670 aaKnown RBP4.59□□□□□ -1.67
CPNE3-204ENST00000517862 SOS1Q07889 1333 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-204ENST00000517862 A0A0A0MRY4 1105 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 DCDC2BA2VCK2 349 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 LCHNA4D1U4 455 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 ENO4A6NNW6 628 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 TLR2O60603 784 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 IL9P15248 144 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 SDHBP21912 280 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 AVPR2P30518 371 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 SRSF1Q07955 248 aaKnown RBP eCLIP4.58□□□□□ -1.68
CPNE3-204ENST00000517862 TBCELQ5QJ74 424 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 TMC7Q7Z402 723 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 CYP2U1Q7Z449 544 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 ZSCAN29Q8IWY8 852 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-204ENST00000517862 RGL4Q8IZJ4 473 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 HELQQ8TDG4 1101 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 SCG3Q8WXD2 468 aaKnown RBP4.58□□□□□ -1.68
CPNE3-204ENST00000517862 SAP130Q9H0E3 1048 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 TSPAN10Q9H1Z9 355 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-204ENST00000517862 RNF19AQ9NV58 838 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 SERTAD1Q9UHV2 236 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 PCDHGC4Q9Y5F7 938 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 IGF2RP11717 2491 aa4.58□□□□□ -1.68
CPNE3-204ENST00000517862 TTC21BQ7Z4L5 1316 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 SH3TC1Q8TE82 1336 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 COL6A1P12109 1028 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 JUNBP17275 347 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-204ENST00000517862 PHKA2P46019 1235 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 CRACR2BQ8N4Y2 399 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-204ENST00000517862 IP6K1Q92551 441 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 EDAQ92838 391 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 CLMNQ96JQ2 1002 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 SETDB2Q96T68 719 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 VPS33BQ9H267 617 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 PRDM5Q9NQX1 630 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-204ENST00000517862 MUTYHQ9UIF7 546 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 ITPR1Q14643 2758 aa4.57□□□□□ -1.68
CPNE3-204ENST00000517862 NAV3Q8IVL0 2385 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 MGAMO43451 1857 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 M0R2N6 131 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 CD33P20138 364 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 VAMP1P23763 118 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 MAPK8P45983 427 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 GDF10P55107 478 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 ERVK-9P63128 1117 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 CLN3Q13286 438 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 NAALADL2Q58DX5 795 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 ZNF513Q8N8E2 541 aaPredicted RBP4.56□□□□□ -1.68
CPNE3-204ENST00000517862 TMC1Q8TDI8 760 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 WFDC12Q8WWY7 111 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 BACH2Q9BYV9 841 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 OSBPL3Q9H4L5 887 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 SLC28A3Q9HAS3 691 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 ARHGEF10LQ9HCE6 1279 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 RAB6BQ9NRW1 208 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 CABP1Q9NZU7 370 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 MSRAQ9UJ68 235 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 GABRQQ9UN88 632 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 MTCH2Q9Y6C9 303 aa4.56□□□□□ -1.68
CPNE3-204ENST00000517862 A0A1B0GTL3 188 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 PSMD14O00487 310 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 TCERG1O14776 1098 aaKnown RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 RPS12P25398 132 aaKnown RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 MSX1P28360 303 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 ERCC5P28715 1186 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 GTF2E1P29083 439 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 IREB2P48200 963 aaKnown RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 EPHB4P54760 987 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 HDLBPQ00341 1268 aaKnown RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 HERC4Q5GLZ8 1057 aaPredicted RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 FAM26DQ5JW98 314 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 C8orf86Q6ZUL3 223 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 DTX1Q86Y01 620 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 FAM43AQ8N2R8 423 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 SREK1Q8WXA9 508 aaKnown RBP4.55□□□□□ -1.68
CPNE3-204ENST00000517862 VTI1AQ96AJ9 217 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 ETNK1Q9HBU6 452 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 OGDHLQ9ULD0 1010 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 FZD1Q9UP38 647 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 GBF1Q92538 1859 aa4.55□□□□□ -1.68
CPNE3-204ENST00000517862 OTOGLQ3ZCN5 2332 aa4.54□□□□□ -1.68
CPNE3-204ENST00000517862 CCL15-CCL14A0A0B4J2E2 113 aa4.54□□□□□ -1.68
CPNE3-204ENST00000517862 YDJCA8MPS7 323 aa4.54□□□□□ -1.68
CPNE3-204ENST00000517862 NDUFB5O43674 189 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms