RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 FBXO11Q86XK2 927 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 MAP3K14Q99558 947 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 LCTP09848 1927 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 NFIBO00712 420 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 GJB1P08034 283 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 RPS6KB1P23443 525 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 CNGA1P29973 690 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 MAP3K21Q5TCX8 1036 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 Q6ZUG5 572 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 PIBF1Q8WXW3 757 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 GTF3C3Q9Y5Q9 886 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 ABCB11O95342 1321 aa16.92■□□□□ 0.3
TOP1MT-203ENST00000517857 DNAJC25-GNG10A0A024R161 153 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 ZBTB43O43298 467 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 EN2P19622 333 aaPredicted RBP16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 CCND3P30281 292 aaPredicted RBP16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 GNAQP50148 359 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 U2AF1L4Q8WU68 220 aaKnown RBP16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 BRF1Q92994 677 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 PIGSQ96S52 555 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 PAK6Q9NQU5 681 aaPredicted RBP16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 CYP39A1Q9NYL5 469 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
TOP1MT-203ENST00000517857 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 ZBTB5O15062 677 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 PLEKHA8P1O95397 391 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 CNTN2Q02246 1040 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 APOBRQ0VD83 1088 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 RIOX1Q9H6W3 641 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
TOP1MT-203ENST00000517857 CYTH3O43739 400 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 CYBAP13498 195 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 CALML3P27482 149 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 GJA8P48165 433 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 BAATQ14032 418 aaPredicted RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 RTN1Q16799 776 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 SLC30A10Q6XR72 485 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 CMTR1Q8N1G2 835 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 RRP36Q96EU6 259 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 SPZ1Q9BXG8 430 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 SEC63Q9UGP8 760 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 MRPL11Q9Y3B7 192 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 LRRC37A2A6NM11 1700 aa16.89■□□□□ 0.29
TOP1MT-203ENST00000517857 SGPL1O95470 568 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 TRAF1Q13077 416 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 C8orf34Q49A92 452 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 PRAMEF19Q5SWL8 479 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 SHISA4Q96DD7 197 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 ZSWIM6Q9HCJ5 1215 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 PCDHA1Q9Y5I3 950 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 SYNGAP1Q96PV0 1343 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 CENPFP49454 3210 aa16.88■□□□□ 0.29
TOP1MT-203ENST00000517857 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 PPP1R11O60927 126 aaPredicted RBP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 SEC24BO95487 1268 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 METAP2P50579 478 aaKnown RBP eCLIP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 MCF2L2Q86YR7 1114 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 SRBD1Q8N5C6 995 aaKnown RBP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 TRPV1Q8NER1 839 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 FGD4Q96M96 766 aa16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 ADD3Q9UEY8 706 aaKnown RBP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
TOP1MT-203ENST00000517857 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 ASB14A6NK59 587 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 IGHA2P01877 340 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 ANAPC15P60006 121 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 RPS6P62753 249 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 PURBQ96QR8 312 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 DDX20Q9UHI6 824 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 NRBP1Q9UHY1 535 aa16.86■□□□□ 0.29
TOP1MT-203ENST00000517857 MSCO60682 206 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms