RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 HSH2DQ96JZ2 352 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 BSDC1Q9NW68 430 aaPredicted RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 TCEAL9Q9UHQ7 104 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 GDF2Q9UK05 429 aaPredicted RBP3.36□□□□□ -1.87
SKP1-204ENST00000517691 MINPP1Q9UNW1 487 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 BCORQ6W2J9 1755 aa3.36□□□□□ -1.87
SKP1-204ENST00000517691 RIC1Q4ADV7 1423 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 UTRNP46939 3433 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 SHISA8B8ZZ34 492 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 GPR25O00155 361 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 SRGAP3O43295 1099 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 PPIP5K2O43314 1243 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 TAF5LO75529 589 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 UFL1O94874 794 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 THBS1P07996 1170 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 ATP4AP20648 1035 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 INPP5BP32019 993 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 IARSP41252 1262 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 IDH3AP50213 366 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 RRP1P56182 461 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 POU4F2Q12837 409 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 PDE3AQ14432 1141 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 MVPQ14764 893 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 TRIP4Q15650 581 aaPredicted RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 METTL24Q5JXM2 366 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 IER5Q5VY09 327 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 XKR5Q6UX68 686 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 KLHDC4Q8TBB5 520 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 RHPN1Q8TCX5 695 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 FBF1Q8TES7 1133 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 IL17RAQ96F46 866 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 GPR101Q96P66 508 aaPredicted RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 EYA3Q99504 573 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 PUS3Q9BZE2 481 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 ZC3H12CQ9C0D7 883 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 ANKRD2Q9GZV1 360 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 SIL1Q9H173 461 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 DNAJC25Q9H1X3 360 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 CHMP4BQ9H444 224 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 ZDHHC3Q9NYG2 299 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 POLLQ9UGP5 575 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 DDX41Q9UJV9 622 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 GGA1Q9UJY5 639 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 DDX19BQ9UMR2 479 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 SUPT16HQ9Y5B9 1047 aaKnown RBP3.35□□□□□ -1.87
SKP1-204ENST00000517691 KCNMB2Q9Y691 235 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 NUP98P52948 1817 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 COL24A1Q17RW2 1714 aa3.35□□□□□ -1.87
SKP1-204ENST00000517691 XDHP47989 1333 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 WTIPA6NIX2 430 aaPredicted RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 TNFRSF21O75509 655 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 C8AP07357 584 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 SPATA31C1P0DKV0 1188 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 PCSK2P16519 638 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 PRELPP51888 382 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 EIF6P56537 245 aaKnown RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 CHRNDQ07001 517 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 UBE4AQ14139 1066 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 RABL6Q3YEC7 729 aaPredicted RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 LRRC24Q50LG9 513 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 PI16Q6UXB8 463 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 NIM1KQ8IY84 436 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 TBC1D16Q8TBP0 767 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 EPS8L3Q8TE67 593 aaKnown RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 ZIC5Q96T25 663 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 OSBPL7Q9BZF2 842 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 FOXD3Q9UJU5 478 aaPredicted RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 PA2G4Q9UQ80 394 aaKnown RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 GJA3Q9Y6H8 435 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 N4BP2Q86UW6 1770 aaPredicted RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 ARFGEF2Q9Y6D5 1785 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 NRXN2Q9P2S2 1712 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 RTL9Q8NET4 1388 aa3.34□□□□□ -1.87
SKP1-204ENST00000517691 AFDNP55196 1824 aaKnown RBP3.34□□□□□ -1.87
SKP1-204ENST00000517691 ZNF804BA4D1E1 1349 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 MROH5Q6ZUA9 1318 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 LTBP3Q9NS15 1303 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 SNAP23O00161 211 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 CPNE3O75131 537 aaKnown RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 FRAT2O75474 233 aaPredicted RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 RAD17O75943 681 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 RPLP1P05386 114 aaKnown RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 MCCP23508 829 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 ATP8B2P98198 1209 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 G3BP1Q13283 466 aaKnown RBP eCLIP3.34□□□□□ -1.88
SKP1-204ENST00000517691 SERINC3Q13530 473 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.34□□□□□ -1.88
SKP1-204ENST00000517691 PLEKHG4Q58EX7 1191 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 WDR44Q5JSH3 913 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 VPS37DQ86XT2 251 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 CCDC74AQ96AQ1 378 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 SLC39A13Q96H72 371 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 FRMD6Q96NE9 622 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 TRERF1Q96PN7 1200 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 MPHOSPH6Q99547 160 aaKnown RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.34□□□□□ -1.88
SKP1-204ENST00000517691 RTFDC1Q9BY42 306 aaPredicted RBP3.34□□□□□ -1.88
SKP1-204ENST00000517691 VPS33BQ9H267 617 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 DBNDD1Q9H9R9 158 aa3.34□□□□□ -1.88
SKP1-204ENST00000517691 ZFYVE28Q9HCC9 887 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms