RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CELA2BP08218 269 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ITIH2P19823 946 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CDK5R2Q13319 367 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 UBE4AQ14139 1066 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SYCP2LQ5T4T6 812 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ANKRD34AQ69YU3 496 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IQSEC1Q6DN90 963 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GPAT2Q6NUI2 795 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PPP4R4Q6NUP7 873 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CDPF1Q6NVV7 123 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CRTC3Q6UUV7 619 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SHISA2Q6UWI4 295 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 DDX53Q86TM3 631 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TOP6BLQ8N6T0 577 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IGSF22Q8N9C0 903 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GPR101Q96P66 508 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PHF20Q9BVI0 1012 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MRPL18Q9H0U6 180 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SEMA6CQ9H3T2 930 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GPRC5CQ9NQ84 441 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PRDM10Q9NQV6 1147 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CHST7Q9NS84 486 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TMEFF2Q9UIK5 374 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 COQ6Q9Y2Z9 468 aa4.3□□□□□ -1.72
SCARNA15.2-201ENST00000516409 E2F8A0AVK6 867 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SIGLEC6O43699 453 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GAS2O43903 313 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MSCO60682 206 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FBXO21O94952 628 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FKBP9O95302 570 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MT-CO1P00395 513 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 APPP05067 770 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 NFICP08651 508 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SLURP2P0DP57 97 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IARSP41252 1262 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CTSKP43235 329 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 USP11P51784 963 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 DSG1Q02413 1049 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PTPN21Q16825 1174 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SGO2Q562F6 1265 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FAM102BQ5T8I3 360 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IGF2-ASQ6U949 168 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FKBP9P1Q75LS8 142 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ZC3H7AQ8IWR0 971 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TCEAL8Q8IYN2 117 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SMC1BQ8NDV3 1235 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 NPLOC4Q8TAT6 608 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 WHAMMQ8TF30 809 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FRS2Q8WU20 508 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 FBLIM1Q8WUP2 373 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 JPH3Q8WXH2 748 aaPredicted RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 COPS5Q92905 334 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PSMG3-AS1Q96PY0 264 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PLVAPQ9BX97 442 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 RHOBTB2Q9BYZ6 727 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ARNT2Q9HBZ2 717 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 VTA1Q9NP79 307 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CHST12Q9NRB3 414 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 THG1LQ9NWX6 298 aaKnown RBP4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PRR13Q9NZ81 148 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SHISA3A0PJX4 238 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ARVCFO00192 962 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ARNTLO00327 626 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TRAF5O00463 557 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TERTO14746 1132 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 AURKAO14965 403 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MEFVO15553 781 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SART1O43290 800 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 PLIN1O60240 522 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GAS7O60861 476 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ABLIM3O94929 683 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 EOMESO95936 686 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 F2P00734 622 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MYL1P05976 194 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MYBL2P10244 700 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 LCP1P13796 627 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IFNGR1P15260 489 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ZSCAN20P17040 1043 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 GPR85P60893 370 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 POU4F1Q01851 419 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 NMIQ13287 307 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 TCIRG1Q13488 830 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SLC4A10Q6U841 1118 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 KSR2Q6VAB6 950 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 HDGFL2Q7Z4V5 671 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ANKLE2Q86XL3 938 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SMC5Q8IY18 1101 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 IFNL3Q8IZI9 196 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CBARPQ8N350 705 aaPredicted RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MAGEB6Q8N7X4 407 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 DTWD2Q8NBA8 298 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 CHTF18Q8WVB6 975 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 Q96M66 194 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 MPHOSPH6Q99547 160 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms